Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq43624 271 5e-67 seq42076 192 4e-43 seq16988 163 2e-34 seq14022 154 1e-31 seq48925 150 1e-30 seq28274 143 2e-28 seq15529 109 4e-18 seq28337 107 1e-17 seq29550 102 5e-16 seq23474 93.3 3e-13 seq61578 87.8 1e-11 >seq43624 Length=797805 Score = 271 bits (300), Expect = 5e-67 Identities = 415/587 (71%), Gaps = 6/587 (1%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||| ||||| ||||| || || ||||||| | ||||||| ||||||| ||||| Sbjct 47148 GGTATAGATTTGGGAACAACATATTCCTGTGTAGGCGCTTGGCAACATGGTAATGTAGAC 47207 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 |||||||| || || ||||| || ||||| || || || |||||| | || ||||| || Sbjct 47208 ATAATTGCAAACGATCAAGGAAACAGAACTACTCCTTCCTATGTTGCGTTCACTGACACG 47267 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 |||| || || |||||||| || ||| |||| | || || |||| |||||||||| Sbjct 47268 GAACGACTGATCGGAGATGCAGCGAAAAATCAGGTAGCTATGAACCCTGATAATACTATT 47327 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || ||||| ||| |||||||||| || || | ||| ||| | ||||| || || || Sbjct 47328 TTCGATGCCAAACGATTGATTGGGCGAAAGTATGACGATCCTACTGTGCAGCAAGACATA 47387 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACAC 474634 |||||||| ||||| || || |||| | || ||||| | || ||| | | Sbjct 47388 AAACATTGGCCCTTTAAAGTCATCAATGATAACGGGAAACCCAAGATTCAAGTATCATTT 47447 Query 474635 GCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTTTTAGCCAAAA 474692 ||| || ||||| ||| | || || ||| || || ||||| || |||| Sbjct 47448 AAAGGAAAAGCTAAAGTATTCACTCCTGAGGAAA--TCAGCAGCATGGTGCTACTAAAAA 47505 Query 474693 TGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 ||||| |||| || ||| || ||| | || | |||||||| |||| || ||||| || Sbjct 47506 TGAAAGAAACAGCTGAG-TCGTATTTAGGCAACAAAGTAACTAATGCCGTTATTACAGTA 47564 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || || ||||| |||||| | || || |||||||| |||||| || || || Sbjct 47565 CCTGCTTACTTCAATGACTCTCAAAGACAGGCTACTAAAGACGCGGGAGCTATCGCTGGC 47624 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGAT 474871 || || || | | || || |||||||| || || || || | ||||| ||||| || Sbjct 47625 CTAAACGTACTTAGAATAATAAATGAACCTACCGCTGCAGCTTTGGCTTACGGTCTAGAC 47684 Query 474872 AAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||||||| | |||| || || ||||||||||||| ||||| Sbjct 47685 AAGAATTTAAAAGGAGAACGCAAAGTGTTAATCTTTGATTTAGGAGG 47731 Score = 134 bits (148), Expect = 9e-26 Identities = 661/1036 (64%), Gaps = 26/1036 (3%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 |||| | |||||| |||| || ||||||||||| | ||||| || ||||||||| Sbjct 47766 GAAGGTTCTCTTTTTGAAGTAAAGGCTACAGCTGGAGACACTCATCTAGGCGGTGAAGAT 47825 Query 475400 TTTGATAATAGACTTGT-ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGA 475458 ||||| || || || || | | | | || ||| || || || || || ||||| || Sbjct 47826 TTTGACAACAGGCTCGTTAACTTTCT-TGCTGACGAATTTAAAAGAAAGTATAAAAAAGA 47884 Query 475459 TCTTTCAACATCTG---CTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 | | ||| ||| | | ||| | | || | | |||||| ||||| || || Sbjct 47885 TAT--CAA-ATCGAACCCAAGAGCGCTTCGTCGCTTGCGTACTGCTGCCGAACGAGCGAA 47941 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 || | ||||||||| ||| || | | | ||| | || |||| | || || || Sbjct 47942 AAGAACACTTTCTTCTAGTACGGAAGCGAACATAGAAATAGACGCTCTGTACGAGGGTAT 48001 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 || | | | | ||| || | || | ||| || || | | ||||| | ||| | Sbjct 48002 AGACTTCTTTTCACGAATTTCACGAGCAAGATTCGAGGAACTAAATGCTGATTTATTTCG 48061 Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAAT-CACAAG 475694 | ||| | |||||||| || ||| | | | ||| | ||| | |||||| | | | Sbjct 48062 CATCACACTAGAACCCGTGGAGAAAGCTTTAAACGATGCCAAAATGGACAAAAGCTCCAT 48121 Query 475695 TCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTT 475754 | |||| |||||| | || || || || || | || || || || |||| | Sbjct 48122 TA-ATGATATTGTTTTGGTTGGCGGCTCGACTCGCATACCTAAGATTC-AGAATCTACTA 48179 Query 475755 CATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCA 475813 || | | || ||||||||||| | ||| | | | ||||| || |||||||| || Sbjct 48180 CAAAACTTCTTCAATGGTAAAAAACTCAATTTATCTATTAATCCGGACGAAGCTGTGGCT 48239 Query 475814 TATGGAGCTGCTGTCCAAGCAGCTATT-TTATCAG-----GTCAATCAGACGAGAAACTA 475867 || || || || || ||||| || || ||| | |||| || | ||| | Sbjct 48240 TACGGCGCAGCAGTTCAAGCTGCGATACTTAGTGGCGAGCGTCATTC---CAAGATTCAG 48296 Query 475868 AATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGG 475927 | || || || ||||| || || | || | ||| ||||||||| || || Sbjct 48297 GACGTGCTTTTA---GTCGACGTCACCCCCTTATCCCTGGGTATTGAAACAGCCGGTGGT 48353 Query 475928 ATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTT 475987 ||||| | || | | || | || || || ||||||| | | || | ||| Sbjct 48354 GTTATGGCAAAGATAGTCGAGCGCAACGCTAAAATTCCATGCACACACTCTCAGACCTTT 48413 Query 475988 TCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAA 476047 |||| ||||| || |||||| | |||| | ||| ||| | | |||||| |||||| | Sbjct 48414 ACCACCTATTCAGACAATCAACCCGCTGTCAACATTCAAGTTTATGAAGGCGAAAGAGCA 48473 Query 476048 TTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCC 476107 | || ||| ||||||| || ||||| || |||| || || || ||||| || Sbjct 48474 ATGACCAAAAATAATAATCTTCTAGGAACATTCGATCTAACTGGAATACCGCCTGCACCT 48533 Query 476108 AGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 | || || || ||||| || ||||| || || || ||||||||||| || ||||| ||| Sbjct 48534 CGCGGTGTGCCGCAAATAGATGTTACGTTCGACATCGATGCAAATGGAATCCTTAACGTT 48593 Query 476168 ACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAAACAATCGTGGT 476227 | ||| || || | | |||||||||||||||| || | || | || Sbjct 48594 TCCGCTAAAGAAAATAGCACTGGCAAGAGTAAAAATATAGTCATAAAGAATGACAAAGGA 48653 Query 476228 AGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCT 476287 ||| | || ||| ||||||| |||||| | || || || | || | |||| | Sbjct 48654 AGACTCTCTAAAGCTGAAATTCAGCGTATGCTAGAAGATGCTGAGATGTATAAAGATGAG 48713 Query 476288 GATAACAAGAGAAAAGCTGC-TATTGATGCAAAGAATGAACTTGAAAATTATGTTCATAG 476346 ||||| ||| |||| || |||| ||| || |||| |||| |||||| | Sbjct 48714 GATAA-TAGACAAAAAGAGCGGATTGCTGCTCGACATCAACTAGAAACTTATGTATTTGA 48772 Query 476347 TGTAAAACAAGCTGTA 476362 ||| ||||||||| || Sbjct 48773 TGTTAAACAAGCTATA 48788 >seq42076 Length=1078381 Score = 192 bits (212), Expect = 4e-43 Identities = 301/420 (72%), Gaps = 12/420 (3%) Strand=Plus/Minus Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565 ||||| |||||||||| ||| || ||||||| | || ||| ||||| | | | ||| Sbjct 714215 AATACAGTTTTTGATGCAAAACGAATGATTGGAAGAAAATTTAATGATCCAAAGATTCAA 714156 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 || || |||||||| || | || || || | ||| || || ||| | Sbjct 714155 CAAGACATTAAACATTGGCCATTCGAAGTTATTTCTGATAATGGCAAGCCGGCTATTGTG 714096 Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTT-CACCGGAACAAATTTCTTCAATGGTT 474682 | ||||||| | | | ||| ||| || ||| |||| ||| ||||||| || |||||| Sbjct 714095 GTTCAATACAAGAAAG---AACGAAAAAAGTTTACACCTGAAGAAATTTCCTCTATGGTT 714039 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || ||||||||||||||| || ||| | ||||| ||| || ||||| || || Sbjct 714038 CTAAGCAAAATGAAACAAACAGCTGAGATG-TATCTCGGAGGTACTGTGACTGACGCGGT 713980 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 || ||||| ||||| |||||||| || |||||||| |||||||||||||| || || Sbjct 713979 TATAACTGTACCAGCGTATTTTAACGACTCTCAACGCCAAGCAACTAAAGACGCTGGGGC 713920 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| || | || ||| | | ||||| |||||||||||||||||||| || ||||| Sbjct 713919 GATTGCCGGATTAAACGTTCTTAGAATTATCAATGAACCAACAGCAGCCGCTCTCGCTTA 713860 Query 474862 TGGTCTTGATAAGAATTCTGACAAAGA-AGTA-AATGTTTTAATCTTTGATTGTGGAGGT 474919 |||| | || || ||| ||| || || || | |||||| |||| || || ||||||| Sbjct 713859 TGGTTTAGACAAAGATT-TGA-AAGGAGAGAAGAATGTTCTAATTTTCGACCTTGGAGGT 713802 >seq16988 Length=137059 Score = 163 bits (180), Expect = 2e-34 Identities = 400/599 (67%), Gaps = 22/599 (4%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTT---GTGTAGCTGTTTGGCAAAATGGTAAA 474388 || || |||||||| || || || ||||| |||| || || ||| | || |||| | Sbjct 56091 ATAGGGATTGATTTGGGTACGAC---CAGTTCGTGTGTGGCGGTATGGAAGAAGGGTACA 56035 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||| | ||| | ||||| |||||||| ||||| || ||||| | || | ||||| Sbjct 56034 GTGGAAGTGATTACAAATGAGCAAGGTAACAGAACGACGCCATCTTTCGTCGCGTTTAC- 55976 Query 474449 GAAACT---GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT 474505 | || |||| ||| ||||| || || || ||| |||| || | || ||| | Sbjct 55975 --ACCTCGCGAACGTCTCATTGGCGAAGCGGCAAAAAATCAGGCGACTTCAAATGCGACA 55918 Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565 ||||| ||||||| || ||| | ||||| |||||| || ||| || |||| ||| Sbjct 55917 AATACGATTTTTGGCGCGAAACGCTTGATAGGTCGTCGTTATGACGACGTTGCTGTGCAA 55858 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA---TATA 474622 ||| | || |||||||| || | || || || | ||||| ||| | ||| Sbjct 55857 ATGGATTTACGCCATTGGCCATTCGAAGTAATCAACGACAAGGGTAAGCCAAAAATTATT 55798 Query 474623 GAA-GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGT 474681 | | ||| | | ||| ||| || | || || |||| | | ||| | Sbjct 55797 GTTTGTTATAAAAA----TCAAAGGAAAGCGTTCGCGCCCGAGGAAATAAGTGCTATGAT 55742 Query 474682 TTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATGCAG 474740 | || ||||| | || | |||| ||| | | |||| | | ||||| | Sbjct 55741 ACTTTTCAGGATGAAGGAGGTGGCTGAATTATAT-TTGAAAAGGAAGGTCAATGATGTGG 55683 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 |||| || ||||| || |||||||| ||| |||| | |||||||||| | |||||| Sbjct 55682 TAATAACGGTTCCCGCGTATTTTAACGATAGTCAAAGACAAGCAACTAGAACGGCGGGAG 55623 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 ||||| ||| ||||||||||| | ||| ||||||| ||||| ||||| ||| | |||| Sbjct 55622 TTATTGCCGGTTTTAATGTTTTAAGGATTGTTAATGAGCCAACTGCAGCGGCATTAGCTT 55563 Query 474861 ATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 ||||| |||||| ||| | | | ||| ||| || ||||| | ||||| || ||| Sbjct 55562 ATGGTTTTGATAGAAATATTAAGAGTGAAAAAAACGTGTTAATTTATGATTTAGGCGGT 55504 >seq14022 Length=299639 Score = 154 bits (170), Expect = 1e-31 Identities = 256/362 (71%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || || | || ||||| || || || || ||||| || ||| | || ||| Sbjct 211759 GATGCCAAGCGACTCATCGGTCGCAAGTTCGAGGACACCACAGTACAAGCCGACATGAAA 211700 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCA 474637 || |||||||| |||| | | || |||||| |||||| | || | | | | || | Sbjct 211699 CACTGGCCTTTCGAGGTAGTCAGTGATGGTGGCAAACCAAAGATTAAGGTATCATACAAA 211640 Query 474638 GGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAA 474696 || ||| ||| || | ||| || ||| || | |||||||| | | |||||||| Sbjct 211639 GGAGAAGATAAGACCTTCTTC-CCTGAAGAAGTGAGCTCAATGGTGCTTACGAAAATGAA 211581 Query 474697 ACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGA-TGCAGTAATTACTGTTCCA 474754 |||| || ||| | || ||||| ||| | | | || |||||||||||| |||||| Sbjct 211580 GGAAACAGCCGAGGCC-TACCTTGG-CAAAACGGTGCAGAATGCAGTAATTACGGTTCCA 211523 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 || || || |||||||| ||| | || || |||||||||||||| | || | ||||| Sbjct 211522 GCGTACTTCAATGATTCACAAAGACAGGCCACTAAAGATGCGGGTACCATCTCTGGTCTG 211463 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 |||||| | ||||| || || ||||| || || || || |||| || |||||||| || Sbjct 211462 AATGTTCTCCGTATCATCAACGAACCGACTGCTGCTGCGATTGCGTACGGTCTTGACAAA 211403 Query 474875 AA 474876 || Sbjct 211402 AA 211401 >seq48925 Length=1097090 Score = 150 bits (166), Expect = 1e-30 Identities = 467/711 (66%), Gaps = 24/711 (3%) Strand=Plus/Plus Query 592213 ATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATTTGAAACACGTGT 592272 ||| ||||| ||||| || |||| || |||||||| || || | || ||| || Sbjct 840556 ATCAGCTAACCCTTGCACTCCAATACCTATAGGTCTGTGACGCATGTTAGAATTTTTTGC 840615 Query 592273 TTTTTCTACTGGATAATAATTTACATCAATAATATTATTTAAATTTCT-TGTAATAATTC 592331 || ||||| ||| |||| ||||||||||| ||||| || |||| ||| || || Sbjct 840616 TTCAGGCACTGGGTAAAAATTAACATCAATAATTTTATT-AAGGTTCTGTGTGATTATCT 840674 Query 592332 TTGCGACCTTGTACAATTTATTATAATCAAACTCTGGAACACCGTTTT--CATGAATAAT 592389 ||| ||| | | ||| || ||||| | | || | ||||| | | | ||| Sbjct 840675 TTGTGACTTCTTTCAACTT--TATAA----AGT-TGTAT----GTTTTATCTTCATTAAC 840723 Query 592390 AAATTTAGGTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTGCAGATGAGAA 592449 ||| || ||| |||||| | ||||||||||| ||| ||||||||| || | | | Sbjct 840724 AAACCTATTCAAAGCAATTGAAGCTAAATTACAAACAGCAACTTCATCTGCTGAAGTGTA 840783 Query 592450 TTCTACAATTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAATCTGATTTGA 592509 ||| |||||||| || | ||| || || || ||| | ||| | ||||| Sbjct 840784 TTCCACAATTTCGGTGCACAAATTACTGCATTTTATGGTGCCAAGATTTTTTTGATTACT 840843 Query 592510 TTTTTGATTGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAATTTGTGTTTC 592569 |||| ||| | ||||||| ||| ||||||||| || ||||| | ||||| ||| Sbjct 840844 TTTTCTATTACATGAATCTTTATACAGCATGTATGGTGTGCCCGTTTCCACTTGTGCTTC 840903 Query 592570 CATTATTTTAAACCATAAATCTCTTGCTTTGATTTGTTTTATAAATCTACCCTCATTTTC 592629 |||||| ||| | ||| ||| || ||| || | |||||| || | ||| Sbjct 840904 TATTATTGCTTTCCACAGTTCTTGAGCTCGGACTTGCTTAACAAATCTTTTTTCCTGTTC 840963 Query 592630 ATATTTAAGATAAGCTTTATTAAATTCTTCACCATATTTTCCTACAATATCTGGAC-ATT 592688 |||||| ||| | | ||||||||| || | | ||| | | || | || Sbjct 840964 ATATTTTTCATACAATGCTTCAAATTCTTCTCCCCAACAATCAGCAAGACCGGGGCAATC 841023 Query 592689 GTGATGGACACATAAGTGACCAATTTTCATCTTTTTCAACACGATCCATGAAAATATTAT 592748 ||| |||||||| || ||| ||||||||||||| ||||| | ||| || | || Sbjct 841024 ATGA-GGACACATTAGACTCCACATTTCATCTTTTTCTACACGTTTCATAAATAAATCTG 841082 Query 592749 TAATCATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTCAGCACCAGTATTTTTCT 592808 ||| ||| | ||||| ||||| |||| || ||| |||||||| || | Sbjct 841083 GGATCCATAAGGCGTAAAATAATTCTCTAGCTCGGACCTCTTCTTTGCCAGTATTCTTTT 841142 Query 592809 TTAGATCAAGGAAGAAAAATATATCACCATGCCAAGGTTCAA--TAAATACCGCAAATGA 592866 | ||||| | || ||| | |||| ||||||||||||| |||||| ||||||| Sbjct 841143 TCAGATCTAAAAACTCAAAAACATCAGAGTGCCAAGGTTCAAGGTAAATA--GCAAATGC 841200 Query 592867 ACCAGCTCTTTTA---CCACCTTGATTCGCATATCTGGCTATGTCATTATA 592914 || | || |||| || ||||| | |||| |||||| | | ||| || Sbjct 841201 TCCCGGTCGTTTATTGCCTCCTTGGTCGACATACCTGGCTGTATTATTGTA 841251 >seq28274 Length=2233603 Score = 143 bits (158), Expect = 2e-28 Identities = 202/276 (73%), Gaps = 12/276 (4%) Strand=Plus/Plus Query 297320 GTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTT 297379 |||||| ||||||||||| ||||| || ||||||||||||| |||| ||| ||||||| Sbjct 924510 GTGTTT--GATTGTTGGTTCGAATCTGGATCTATGCCTTATGCTCAATGTCACTATCCTT 924567 Query 297380 TTGAAAATTCCGAAATTTTAGACACTTCACAAGATTATATT-GCAGATTTTATAACAGAA 297438 ||||||| | ||| ||| | | || | ||| | || ||||||| | ||| Sbjct 924568 TTGAAAA---CAAAAA---AGA-ATTCGACGATATTTTCCCAGCTAATTTTATTGCTGAA 924620 Query 297439 TCAATTGATCAAACAAGAGGTTGGTTTTATAC-TTTATTAGTTCTTTCTACAGCTATATT 297497 ||| |||||||| ||||| ||||||||||| ||||| || || || ||||| | || Sbjct 924621 GGAATAGATCAAACTAGAGGCTGGTTTTATACACTTATT-GTGCTGTCAACAGCCTTGTT 924679 Query 297498 TAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACA 297557 |||||||||| |||| ||||| |||||| | || | | || | |||||||| Sbjct 924680 TAACAAACCACCATTCCAAAATCTAATTGCGAATGGCTTAATCCTAGCCTCAGATGGACA 924739 Query 297558 AAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCC 297593 ||||||||| || | ||| || ||||||||||| Sbjct 924740 AAAAATGTCTAAGCGAAAAAAGAACTATCCTGATCC 924775 >seq15529 Length=2518921 Score = 109 bits (120), Expect = 4e-18 Identities = 123/162 (76%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| ||||| ||||||||||| |||||||||||| |||| ||||| || || || ||| Sbjct 747469 GATTTCTCATCACCAAATATTGCCAAGGAAATGCATGTTGGTCACTTAAGGTCCACTATA 747410 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGA-TGTGAAGTACAAAGAATAAA 817218 || ||||| ||||| |||| ||| |||| || | ||| || | | || Sbjct 747409 ATAGGTGATAGCATTTGTCGAATTCTTGAGTTTT-TGAACCATGATGTCTTGCGTTTGAA 747351 Query 817219 TCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 |||| | ||||||||||||||||||||||| ||||| || || Sbjct 747350 TCATTTAGGTGATTGGGGAACACAATTTGGAATGTTGATAGC 747309 >seq28337 Length=3380 Score = 107 bits (118), Expect = 1e-17 Identities = 178/250 (71%), Gaps = 14/250 (6%) Strand=Plus/Plus Query 297421 GCAGATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATA--CTTTATTAG 297478 || ||||||||| | ||| |||||||||||| |||| ||||| |||| ||| || | Sbjct 3103 GCTGATTTTATAGCTGAAGGTATTGATCAAACACGAGGATGGTTCTATAGTCTTCAT--G 3160 Query 297479 TTCTTTCTACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTG 297538 | | ||||| | ||||| |||||||| ||||| || ||| |||||| || |||| Sbjct 3161 TCATCTCTACTTTACTCTTTAATAAACCAGCCTTTAAGAACGTAGTTGTTAATGGTATTG 3220 Query 297539 TTAACGCAGCTGATGGACAAAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAAT- 297597 ||| |||| |||||| || |||||| |||||||| ||||||||| ||| || Sbjct 3221 TTA--GCAGATGATGGTCAGAAAATGAGTAAAAGTAAGAAGAATTATCCTAGTCCCGATT 3278 Query 297598 --ATTTTGATGGATAAATATGGTGCAGATACT-TTACGTCTTTATTTATTATCAACACCT 297654 ||||| | || | | |||||| || | | ||| || ||| ||| | || | || Sbjct 3279 TGATTTTAA---ATGAGTTTGGTGCTGACAGTCTTAGATC-TTACTTAATTTCTAGTCCA 3334 Query 297655 GTAGTTAAAG 297664 |||||| ||| Sbjct 3335 GTAGTTGAAG 3344 >seq29550 Length=670265 Score = 102 bits (112), Expect = 5e-16 Identities = 223/332 (67%), Gaps = 13/332 (4%) Strand=Plus/Minus Query 356235 TAATGAAGGCCAAAAACGATGAATTAAATTCATTATTAATCCTTTAATATGATATCCATC 356294 |||| ||||||| | ||||||| || || ||||| | ||||| ||||| |||| || Sbjct 341211 TAATTCAGGCCAATTATGATGAATGAAGTTGATTATAAGACCTTTGATATGTGATCCGTC 341152 Query 356295 AACGTCTTGATCTGCTAAAATCATAATACTACCATACCTAAGTTCTTTAAGATCATTA-- 356352 || ||||| || | ||||| | | || ||||| | | ||| | ||||| | Sbjct 341151 TTGATCCTGATCAGCCATTATCATCACTTTCCCGTACCTCAATGTTTTTAAATCATCAAG 341092 Query 356353 -----TATACTTTTCCTTG--CTCTAAACCAACAAttttttttATAGCAGTTATTTCTTC 356405 | || || | ||| || || ||| | |||||| | | | | ||||| | Sbjct 341091 TGTGTTGTATTTCTTTTTGTACTGTAGACCGAGAATTTTGATCAGATTGTTAATTTCAAC 341032 Query 356406 ATTACTTGCGACAATTGCTGGACTTTTGGTTCT--TACATTTAGTGGTTTTCCTTTTAAT 356463 || || | | | ||| | | | || || ||| || | ||||| || |||||| Sbjct 341031 GTT--TTCCAAAACTTGTTTGTGTGATGCATCACGTACGTTCAACGGTTTACCCTTTAAT 340974 Query 356464 GGGAAAATACCATAATAATCTCTTCCGACAACATTTAATCCAGACATAGCAAATGCTTTA 356523 ||||| | ||| |||| |||||| || || ||| | | ||| || | ||| |||| |||| Sbjct 340973 GGGAAGACACCGTAATGATCTCTGCCAACTACACTGAGTCCCGATACAGCTAATGTTTTA 340914 Query 356524 GCTGAATCTCCTTCAGTAAGAATTAAAGTACA 356555 ||||| ||||| ||||||||||||| ||||| Sbjct 340913 GCTGAGTCTCCCTCAGTAAGAATTAGGGTACA 340882 Score = 86.0 bits (94), Expect = 4e-11 Identities = 187/280 (67%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 357386 ATATATTAGCTAATTTAGAACCAAAACCATTTTTACCACCCACTGTTTTCTTTTCGTTTT 357445 |||| ||| | ||| | ||| | ||||| ||||||| | ||||| ||| | | Sbjct 340036 ATATGTTACAAAGTTTTGCACCGTACCCATTCCTACCACCTGTTACTTTCTCTTCTTCAT 339977 Query 357446 TATCATAATTAGTTGATGTCAAAAGTTCTCCAAAAATCATAGATGGTACTAAAATTTTAT 357505 || ||||| | ||||||||||| | ||||||||||||| ||| || | ||||| | Sbjct 339976 CATTGTAATTTGAAGATGTCAAAAGATGGCCAAAAATCATAGTTGGAACATACATTTTTT 339917 Query 357506 GCTCTTTATGTTCAACCACATCAATACCATCACCATTATTCCAGACAGTAATCTTACCTG 357565 |||||||| ||| || ||||||| |||||| || | || | || || | Sbjct 339916 CATCTTTATGCATAACAACTGGAATACCACAACCATTGTTGTAAACTGATATAGTATTTT 339857 Query 357566 TATCTTGTTCTATATTAACTTTTATTGTATTACATGTCGAACACCTATTATTATGATCTG 357625 ||||| | ||| | || | | ||| || | | ||| || | |||| || | Sbjct 339856 GCTCTTGGTTTATGTCAATTCTAATTACATCCATTTTTGAATCTCTCTGCTTATTGTCAG 339797 Query 357626 CTGCGTTAACTAATACTTCATCATAAATTTTATATAAACC 357665 | ||||| || || | ||||||||||||||| || | ||| Sbjct 339796 CAGCGTTCACCAAAATTTCATCATAAATTTTGTACAGACC 339757 >seq23474 Length=2349451 Score = 93.3 bits (102), Expect = 3e-13 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 321827 ATTTGGATCAGATGTGATAACTGTACGACCAGACATATCAACACGTTTACCCATAAGATT 321886 ||||||||||| ||| ||||| |||||| | || | ||| |||||||| |||||||| || Sbjct 1585917 ATTTGGATCAGGTGTAATAACAGTACGAGCTGAAAAATCTACACGTTTTCCCATAAGGTT 1585858 Query 321887 TCCTCTAATACGACCTTCTTTTCC 321910 |||||| || | |||||||||||| Sbjct 1585857 TCCTCTTATTCTACCTTCTTTTCC 1585834 >seq61578 Length=3623949 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| ||||||||||| | || ||||| ||| | ||| || ||||| || | ||| Sbjct 3475968 ACGGAGACGGAGTACCAAGTGGAGTGTCGACTCTTTTTGGATG--TTATAGTCTGATAGT 3475911 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | ||| || | || || || || || ||||||||||| || || || || || Sbjct 3475910 GTACGACCATCCTCCAACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATA 3475851 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 ||||| |||||||| || || ||| || || ||||| || | | || | ||| Sbjct 3475850 CCTTCTTTGTCTTGGATTTTAGCTTTAACGTTCTCGATAGTGTCTGAGGGTTCAACTTCG 3475791 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||||| || || || | ||||| ||||| || || Sbjct 3475790 AGGGTAATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTG 3475750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265468802986676