Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq43931 114 2e-19 seq40360 114 2e-19 >seq43931 Length=2439668 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | ||| ||| ||| | ||| | ||||| ||||| | ||| | | | Sbjct 171319 GCTTGGCTAATTCACCGGGCAGTAGCAGTCTCACGGATGTCTGCACCTCCCTTGATGTTA 171378 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || |||||| |||||| | |||| || |||| | Sbjct 171379 TGGTAGAGCGCTTGTTGTAGTGGGCGAGACGGGAGGCCTCAGCCGCGATACGTTCGAAGA 171438 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||| ||||||| ||||| | |||| | || || || |||||||| Sbjct 171439 TGTCGTTGACGAACGAATTCATGATAGACATGGCCTTGCTCGATATACCGGTGTCGGGGT 171498 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||| ||||| ||| Sbjct 171499 GCACTTGTTTGAGCACTTTGTAAATG 171524 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | ||| ||| ||| | ||| | ||||| ||||| | ||| | | | Sbjct 179250 GCTTGGCTAATTCACCGGGCAGTAGCAGTCTCACGGATGTCTGCACCTCCCTTGATGTTA 179309 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || |||||| |||||| | |||| || |||| | Sbjct 179310 TGGTCGAGCGCTTGTTGTAGTGGGCGAGACGGGAGGCCTCAGCCGCGATACGTTCGAAGA 179369 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||| ||||||| ||||| | |||| | || || || |||||||| Sbjct 179370 TGTCGTTGACGAACGAATTCATGATAGACATGGCCTTGCTCGATATACCGGTGTCGGGGT 179429 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||| ||||| ||| Sbjct 179430 GCACTTGTTTGAGCACTTTGTAAATG 179455 >seq40360 Length=19948 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | ||| ||| ||| | ||| | ||||| ||||| | ||| | | | Sbjct 2318 GCTTGGCTAATTCACCGGGCAGTAGCAGTCTCACGGATGTCTGCACCTCCCTTGATGTTA 2377 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || |||||| |||||| | |||| || |||| | Sbjct 2378 TGGTCGAGCGCTTGTTGTAGTGGGCGAGACGGGAGGCCTCAGCCGCGATACGTTCGAAGA 2437 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||| ||||||| ||||| | |||| | || || || |||||||| Sbjct 2438 TGTCGTTGACGAACGAATTCATGATAGACATGGCCTTGCTCGATATACCGGTGTCGGGGT 2497 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||| ||||| ||| Sbjct 2498 GCACTTGTTTGAGCACTTTGTAAATG 2523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6101953778875279