Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq44641 87.8 2e-12 seq23474 84.2 3e-11 >seq44641 Length=341842 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 201147 GGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGAAGATAGTGTT 201206 ||||||||| ||||||| || || ||||||||| |||||||| || ||||| |||||| Sbjct 232953 GGTATTAATTCAATTGTTGCTATCCTATGTTACACAGGATACAACCAGGAAGACAGTGTT 233012 Query 201207 ATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTC 201242 ||||| ||| | | || |||||||||| || ||| Sbjct 233013 ATTCTAAATGCATCTGCTGTTGAAAGAGGATTTTTC 233048 >seq23474 Length=2349451 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 53079 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAG 53138 |||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||| Sbjct 1586273 CTTACAATGCTGATTTTGATGGAGATGAAATGAATTTACATGTTCCGCAGTCTATGGAAA 1586332 Query 53139 CTACTGCAGAA 53149 || ||| ||| Sbjct 1586333 CTCGTGCTGAA 1586343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654762435283000