Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq61578 156 8e-33 seq48925 136 8e-27 >seq61578 Length=3623949 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | || || ||||| ||||| || || |||||||| || || || |||| Sbjct 3474668 TACCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAG 3474609 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| | ||||| || || ||||| | |||||| || ||||| | Sbjct 3474608 ACAATGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGGTCTGGGG 3474549 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| || || ||||||||||| || || ||||| | Sbjct 3474548 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAA 3474489 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 3474488 CTTCTAATGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474440 Score = 152 bits (168), Expect = 1e-31 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | || || ||||| ||||| || || |||||||| || || || |||| Sbjct 3474440 TACCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAG 3474381 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| || ||||| || || ||||| | ||| || || ||||| | Sbjct 3474380 ACAATGTGCGTCCATCTTCCAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGG 3474321 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| || || ||||||||||| || || ||||| | Sbjct 3474320 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAA 3474261 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || || ||||| ||||| ||||| ||||| |||||||| Sbjct 3474260 CTTCTAATGTGATGGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474212 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | || || ||||| ||||| || || |||||||| || || || |||| Sbjct 3474212 TACCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAG 3474153 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||| || |||| || || ||||| | ||| || || |||| | Sbjct 3474152 ACAATGTGCGTCCATCTTCCAGCTGTTCGCCGGCGAAGATCAATCTCTGCTGGGCTGGGG 3474093 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| ||||| ||||| || || ||||||||||| || || ||| || | Sbjct 3474092 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAAGGCTCCA 3474033 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || || || || |||||||| ||||| ||||| || || ||||||||| Sbjct 3474032 CCTCTAAGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAAATCTGCATT 3473983 Score = 93.3 bits (102), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 82710 TCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAA 82769 ||||| ||||| ||||| || || ||||||||||| || || ||||| ||||| || Sbjct 3474768 TCCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAACTTCTAAT 3474709 Query 82770 GTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 3474708 GTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474668 >seq48925 Length=1097090 Score = 136 bits (150), Expect = 8e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||| | | || || ||||| || || ||||| ||||| || || || || | Sbjct 515405 TACCTCCTCGAAGCCTCAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGG 515346 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || ||||||| ||||| || || ||||| | |||||| |||||||| | Sbjct 515345 ACAACGTACGTCCATCTTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTG 515286 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || |||||||| || |||||||||||||| || || ||| | ||| | Sbjct 515285 GAATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAA 515226 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 | || || ||||| || || || || | || ||||| || ||||||||| || Sbjct 515225 CCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCATTGTT 515173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981032328960393