Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq61578 104 2e-17 seq48925 102 7e-17 >seq61578 Length=3623949 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | ||| || || | || |||||||| | || || || Sbjct 3474175 CTCTTTCTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCCAGCTGTTCGCCGGCGAA 3474116 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||||||| | | || | || ||||||||| |||||| ||| | | | Sbjct 3474115 GATCAATCTCTGCTGGGCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATT 3474056 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | |||||||| | ||||| || || |||||||| || ||||| Sbjct 3474055 TTCAATTGTGTCCGAAGGCTCCACCTCTAAGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 3473996 Query 35725 AAATATCTGCATTCTGT 35741 || ||||||||| ||| Sbjct 3473995 GAAAATCTGCATTTTGT 3473979 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | ||| || || | || |||||||| || || || || Sbjct 3474403 CTCTTTCTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCCAGCTGTTTGCCGGCGAA 3474344 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||||||||| | || | || ||||||||| |||||| ||| | | | Sbjct 3474343 GATCAATCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATT 3474284 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || || | ||||| ||||| || ||||| || || || Sbjct 3474283 TTCAATTGTGTCCGAGGGTTCAACTTCTAATGTGATGGTTTTGCCAGTCAAGGTCTTGAC 3474224 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3474223 AAAGATCTGCAT 3474212 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || | ||| || || | || |||| ||| || || || || Sbjct 3474631 CTCTTTCTGAATGTTGTAGTCAGACAATGTGCGTCCATCTTCCAACTGTTTGCCGGCGAA 3474572 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | |||||||| | || | || ||||||||| |||||| ||| | | | Sbjct 3474571 GATCAATCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTAACATT 3474512 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || || | ||||| || || || ||||| || || || Sbjct 3474511 TTCAATTGTGTCCGAGGGTTCAACTTCTAATGTGATGGTCTTGCCAGTCAAGGTCTTGAC 3474452 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3474451 AAAGATCTGCAT 3474440 >seq48925 Length=1097090 Score = 102 bits (112), Expect = 7e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 35506 ATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATC 35565 ||| || || || | |||||||||||| || | || ||||| || |||||||| || Sbjct 515407 ATTACCTCCTCGAAGCCTCAACACCAAGTGAAGTGTTGATTCCTTCTGGATGTTGTAGTC 515348 Query 35566 GGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGA 35625 || ||| || || | || || | ||| || || || || ||||| | ||||| || | Sbjct 515347 GGACAACGTACGTCCATCTTCTAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGG 515288 Query 35626 AGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATT 35684 |||| || ||| |||| | ||| ||| || || | | || | | ||||| | || Sbjct 515287 TGGAATGCCCTCTTTGT-CTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTT 515229 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 | ||||| | ||| || ||||||||||| | ||||| || || ||||||||| Sbjct 515228 CAACCTCTAACGTTATGGTTTTACCCGTGAGGGTTTTTACGAAGATCTGCATT 515176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450437546309960