Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq48068 93.3 3e-14 >seq48068 Length=254185 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 || ||||| ||||||||||| || || ||||| ||||| ||||| || || ||| Sbjct 224706 GTGTTGGCATTTTTTGCTGCTTCTGATGGTATAGTAAATGAGAATTTAGTAGAGCGATTT 224765 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | |||||||||||| | |||||| | | |||||||| |||||||| || || ||| Sbjct 224766 TCACAAGAAGTTCAAATCGGTGAAGCAAGGTTCTTTTATGGATTTCAAATCGCTATGGAA 224825 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 ||| | || || || |||||| | |||| ||||| || || Sbjct 224826 AATGTACACTCTGAGATGTACTCCTTGTTGATTGATACATATAT 224869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397149922487935