Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq48925 95.1 1e-14 >seq48925 Length=1097090 Score = 95.1 bits (104), Expect = 1e-14 Identities = 450/707 (64%), Gaps = 31/707 (4%) Strand=Plus/Plus Query 118173 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 118232 ||||| | || || || | ||| | || |||||| ||||||| || || |||||||| Sbjct 840203 CGTCTTTGGTAAATGTTTGATGTGAACGGTTCAAAGGACTCATTATTTCCTAAGATTTGT 840262 Query 118233 GCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 118292 ||||| || ||||||||||| || || | ||||| || ||||| || | || | Sbjct 840263 GCTGTAGACGCTGTGGGCATTGGAGCTAATAGAAGTGAATTGCGGAGTCCATGTTTGGCA 840322 Query 118293 ATGCGTTCCTTGAGAGC------GTCCCAGTCGT-AGTTG-AGCTTTGTCTCCCCCTGCC 118344 || || || ||| || |||| | ||||| || ||| || || Sbjct 840323 ATTTTATCTTTCAGAATAGACCAGTTCCAGAGATCAGTTGGAGTTTTATC--------CC 840374 Query 118345 ACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGC 118404 |||| ||| | || | ||| |||||| || || ||| ||| |||| ||| | Sbjct 840375 ACATGTCATATTGCAAGATGCCTTGGCTTGCAGGACTTCCTTCATATGTACTATAAACTC 840434 Query 118405 CCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAA 118464 |||| | ||||| ||| | || || || | ||| ||| ||| || ||||| || | Sbjct 840435 CCTCTTTTTGCGCCAGTTCACAACTGGCTTCTAATGCTCCGTAATATATGGTTTCGAAGA 840494 Query 118465 TGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAAT 118523 | | || | | | || || || ||| | | || | ||| | | |||| Sbjct 840495 TTTGTTGGTTAAGTTTAATTGCTTCTTCACTTTCATATG-GAATGCGCATTAGTACAAAT 840553 Query 118524 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGA 118583 ||| || | ||||| || || | || || || | || | ||| ||||| || Sbjct 840554 GTATCAGCTAACCCTTGCACTCCAATACCTATAGGTCTGTGACGCATGTTAGAATTTTTT 840613 Query 118584 GCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 118643 || ||| || |||||||| ||| |||| |||| || || | |||| | | Sbjct 840614 GCTTCAGGCACTGGGTAAAAATTAACATCAATAATTTTATTAAGGTTCTGTGTGATTATC 840673 Query 118644 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATAC 118700 ||||||| ||| | | |||| || ||| || || | ||||||| ||| || Sbjct 840674 TTTGTGACTTCTTTCAACTTT-----AT-AAAGTTGTATGTTTTATCTTCATTAACAAAC 840727 Query 118701 TTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACT 118758 || | || ||||| || | |||||| |||| ||||| || | |||||| | Sbjct 840728 CTATTCAAAGCAATTGAAGCTAAATTACAAACAGCAACTTCATCTGCTGA--AGTGTATT 840785 Query 118759 CTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 118818 | | |||||| |||||||| || | || |||||||| | || |||||||| | Sbjct 840786 CCACAATTTCGGTGCACAAATTACTGCATTTTATGGTGCCAAGATTTTTTTGATTACTTT 840845 Query 118819 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 118865 || | ||||| | ||| || || ||||||||||| || ||||| ||| Sbjct 840846 TTCTATTACATGAATCTTTATACAGCATGTATGGTGTGCCCGTTTCC 840892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617946736687720