Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq61578 98.7 6e-16 >seq61578 Length=3623949 Score = 98.7 bits (108), Expect = 6e-16 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || || | || ||||| || || ||| || |||||||| || || || Sbjct 3474210 CCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 3474151 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| || |||| ||||| || || || | ||| ||| | || || Sbjct 3474150 AATGTGCGTCCATCTTCCAGCTGTTCGCCGGCGAAGATCAATCTCTGCTGGGCTGGGGGG 3474091 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | ||||| | ||||||||| |||||| Sbjct 3474090 ATGCCCTCCTTGTCTTGGATC-TTGGCCTTAACATTTTCAATTGTGTCCGAAGGCTCCAC 3474032 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG--ATTGTA 34716 || | ||| || || || || || || || ||||| ||||||||||| ||| |||||| Sbjct 3474031 CTCTAAGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAAATCTGCATTTTGTAATTGTA 3473972 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || || | || ||||| || || ||| || |||||||| || || || Sbjct 3474438 CCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 3474379 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| || ||||| ||||| || || || | ||| ||||| || || Sbjct 3474378 AATGTGCGTCCATCTTCCAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGG 3474319 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | ||||| | ||||||||| | || || Sbjct 3474318 ATGCCCTCCTTGTCTTGGATC-TTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAAC 3474260 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || ||||| || || || || || ||||| |||||||| Sbjct 3474259 TTCTAATGTGATGGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474212 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| || || | || ||||| || || ||| || |||||||| || || || Sbjct 3474666 CCACCTCGGAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGAC 3474607 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| | ||||| ||||| || || || | || ||||| || || Sbjct 3474606 AATGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGG 3474547 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | ||||| | ||||||||| | || || Sbjct 3474546 ATGCCCTCCTTGTCTTGGATC-TTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAAC 3474488 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || || || || || || ||||| |||||||| Sbjct 3474487 TTCTAATGTGATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314487229390571