Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq18715 268 8e-67 >seq18715 Length=1377716 Score = 268 bits (296), Expect = 8e-67 Identities = 650/974 (67%), Gaps = 19/974 (2%) Strand=Plus/Plus Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200 ||||||||||| ||||||||||| ||| | || || || || || || ||| | Sbjct 1370005 GCGTACTTTGTTGAATGGGGTGTTTACCCAAGAAAATTCCCAGTCGATCGTGTACCGATT 1370064 Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260 || ||| | ||||| | |||||||||| ||||| || || || ||||||||||||||| Sbjct 1370065 CCTAATCTGACGCATCTTTTGTACGGTTTCATTCCTATTTGCGGAGGCGACGGCATCAAC 1370124 Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320 ||| | || || |||||||| | ||| | |||||||| ||| |||| ||| Sbjct 1370125 GACAGTTTAAAGGAGATCGAAGGCAGTTTCCAAGCTCTTCAACGATCATGCAGCGGCCGC 1370184 Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380 || ||||||||||| || || |||||| |||||||| | || || || || || || Sbjct 1370185 GAAGATTTCAAAGTTTCTATTCACGACCCGTGGGCCGCTCTTCAGAAGCCACAGAAGGGA 1370244 Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440 || | | ||||| || || ||||||||||||||||| || ||||| | |||| Sbjct 1370245 CTGTCTTCCTGGAATGAACCATACAAAGGCAACTTTGGTCAGCTGATGTCTCTCAAACAA 1370304 Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGAC-GTTGTCGGACCCGTT 109499 || | ||| | ||||||||||||| ||||| || || ||||| ||| || ||| | Sbjct 1370305 GCCAGGCCTGAACTTAAAATTCTACCTTCCATCGGAGGCTGGACTCTTGCCGATCCCTTC 1370364 Query 109500 TTATTTTATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTTTT 109559 || || | | ||| | ||| |||| |||||||| || ||| || ||| | Sbjct 1370365 TTCTTCT-TCACCGACAAAGAGAAGAGAGGTCGCTTCGTTGATTCTGTGAAAGATTTTCT 1370423 Query 109560 ACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAGGG 109619 | | ||||| ||||| ||||| || || || |||||||| || || ||||| ||||| Sbjct 1370424 TCTAACCTGGAAGTTCTTCGACGGTGTTGATATCGATTGGGAATTCCCTGGCGGTAAGGG 1370483 Query 109620 TGCCAATCCGAGTCTCGGCGACGCAACGCGCGACAGCAAAACGTACATTGCGTTGTTAAA 109679 || || || || || | | | | ||| | | ||| ||| || | || Sbjct 1370484 AGCTAACCCTGACCTAGGAAGCCCTAAG---GACGGAGATGTTTACGTTGAATTAATGAA 1370540 Query 109680 AGAGTTGCGCGCCATGTTGGACGA-CTTGC--AAACGGCCACCAACAAAACGTACGAATT 109736 || ||||| | |||||| |||| ||| | || | || || ||| ||||| | Sbjct 1370541 GGAATTGCGTGAAATGTTGAACGACCTTTCTGAAGAGACCGGTAAGAAA---TACGAGCT 1370597 Query 109737 GACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTAC-GCGTCGGCGC 109795 ||| ||| ||||| || || | ||||| ||| | |||||||||||| ||| ||| | Sbjct 1370598 GACTTCCGCTATTAGTGCTGGATGGGATAAGATTCAAGTGGTCGATTACAGCG-AGGCTC 1370656 Query 109796 AACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAA--- 109852 | |||| |||| | || || | |||| || ||||| |||||||| ||||| | Sbjct 1370657 AGAAATACATGGATCACATTTTCCTCATGAGTTATGATTTTAAAGGCGCCTGGTCTAATG 1370716 Query 109853 ACACGGACTTAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGT 109912 |||| | | || |||| || | | ||||| || | ||||| || || ||| | Sbjct 1370717 ACAC---CCTCGGTCATCAGACACCGCTTTACGCTCCTGCTTGGAACCCCAAGGAAACTT 1370773 Query 109913 ACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTA 109972 | || || || | | || ||| | || | ||| || ||||| || ||| Sbjct 1370774 ATACCACTGACTTTGGTGTGAAATATTTGCTTGCTCAAGGCGTCAACCCTAAGAAGATTG 1370833 Query 109973 TAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCGTCGTGCACGCCGACGACGCGA 110032 | | || ||||| |||||||| || |||||||| || || || ||| | | Sbjct 1370834 TGGTGGGTGTAGCTATGTACGGACGAGGCTGGACCGGGGTTCACAACTACGAAAATAACA 1370893 Query 110033 ATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGGTGG 110092 |||| || |||| ||| | || || || |||| |||||| || |||| || || | Sbjct 1370894 ATCCATTCACTGGCAACGCGACTGGACCTGTCAAAGGTACTTGGCAAGACGGTGTAGTTG 1370953 Query 110093 ACTATCGTCAAATA 110106 | ||| | ||||| Sbjct 1370954 ATTATAGAGAAATA 1370967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409345323674433