Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq48068 120 3e-22 >seq48068 Length=254185 Score = 120 bits (132), Expect = 3e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 ||||| ||||| |||| |||||| ||||| || |||||||| |||||| | || ||||| Sbjct 224845 TACATCTCAGAGTGTACATTTTCCATAGCGATTTGAAATCCATAAAAGAACCTTGCTTCA 224786 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | ||||||||| | |||||| |||||||| || || ||||||||||| ||| Sbjct 224785 CCGATTTGAACTTCTTGTGAAAATCGCTCTACTAAATTCTCATTTACTATACCATCAGAA 224726 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 || |||||||| ||||| ||||| ||||||| Sbjct 224725 GCAGCAAAAAATGCCAACACATGTTTAATAAAGT 224692 Score = 91.5 bits (100), Expect = 1e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 |||||||||||| || |||||||| ||||| ||||| || ||||| ||||| |||||| Sbjct 224545 TAAATCAACTTCCTCCACAGTCCAGAACGAAGCTTCAGCCTTTTTATACATTTGCCAAAT 224486 Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAA 5131 ||||||||| || || |||| ||||| || Sbjct 224485 ATCAGGATATTGGATAGGAAAGATGACGAA 224456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426720732706271