Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq48925 596 2e-165 seq48068 132 7e-26 seq63168 102 1e-16 >seq48925 Length=1097090 Score = 596 bits (660), Expect = 2e-165 Identities = 1212/1785 (68%), Gaps = 31/1785 (2%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||||||||| | | | || || ||| | |||| ||| ||||| || |||| Sbjct 839829 CAACTGTGAACTGAATTGCATTAGCGGCAGGCTTTATGCGTAAATAATACATTCCTGTTT 839888 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||||| ||||| |||| || || || || | ||| |||| | || || | Sbjct 839889 TCAGACCCATTTTCCATGCGTAAAAGTGAATCGACGTCAATTTTCCATAATTAGGTTCAG 839948 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | | |||||| || | ||| |||||||| || || || |||||||| ||||| ||||||| Sbjct 839949 CCACATGAATGTTAAACGATTGACTTTGGTCTATAAATGCTCCTCTGTCAGCGGCCATTT 840008 Query 75552 TTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 75609 | || || | |||| | | ||| ||||||| ||||| | | | | | ||||| | Sbjct 840009 TAAT--TGTTGTTTTAACTGAAATCTCCCAAACTGTTTTATACAACTCTCTAATATCTTT 840066 Query 75610 TGGAAGA---TTTGTATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTC 75666 ||| | | | ||||||||||||| || | ||| || |||||| || || Sbjct 840067 TGGTATACGCTCAATATTTTGAATGGAACCATTGTTGTGTATTATCAGATTCTTCATGTC 840126 Query 75667 ATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAA 75726 || | ||| || | | || ||||| |||| | | |||| | ||||||| || || Sbjct 840127 TTCGTCCCATAAATCTGCCTGTGTTAAGTCTCTCAATAAATGATGGTTAACAACCTGGAA 840186 Query 75727 TTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 75786 |||||||||||| || | || |||||| || || | ||||| | || ||||| Sbjct 840187 TTCTCCAGACAAAACACGTCTTTGGTAAATGTTTGATGTGAACGGTTCAAAGGACTCATT 840246 Query 75787 GTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATA-AACT--ATT 75843 ||||| || ||||| || || || || || ||||| || | | |||| || | ||| Sbjct 840247 ATTTCCTAAGATTTGTGCTGTAGACGCTGTGGGCATTGGAG---CTAATAGAAGTGAATT 840303 Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGG 75903 | ||| |||||| | ||||||||||| ||| ||| | ||| ||||| | ||| Sbjct 840304 GCGGAGTCCATGTTTGGCAATTTTATCTTTCAGAATAGACCAGTTCCAGAGATCAGTTGG 840363 Query 75904 TACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGT 75963 |||||| | || ||||| | || || | ||| ||| ||| | |||||| Sbjct 840364 AGTTTTATCCCACATGTCATATTGCAAGATGCCTTGGCTTGCAGGACTTCCTTCATATGT 840423 Query 75964 TTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAAT 76023 ||| || || |||| || ||||| ||||| || ||||| || |||||||| || Sbjct 840424 ACTATAAACTCCCTCTTTTTGCGCCAGTTCACAACTGGCTTCTAATGCTCCGTAATATAT 840483 Query 76024 TGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAA 76083 |||||||| || | | ||||| | ||||| ||| ||| | ||| | | Sbjct 840484 GGTTTCGAAGATTTGTTGGTTAAGTTTAATTGCTTCTTCACTTTCATATGGAATGCGCAT 840543 Query 76084 AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 || | ||||| ||| |||| || || ||||||||||| |||||||| || | | | || Sbjct 840544 TAGTACAAATGTATCAGCTAACCCTTGCACTCCAATACCTATAGGTCTGTGACGCATGTT 840603 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203 ||| ||| ||||| || | |||||| |||||| ||| ||||||||||| || |||| Sbjct 840604 AGAATTTTTTGCTTCAGGCACTGGGTAAAAATTAACATCAATAATTTTATTAAG-GTTCT 840662 Query 76204 G-ACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT---ATCA 76259 | | || || || || || | || | ||| | || || |||| | | Sbjct 840663 GTGTGATTATCTTTGTGACTTCTTTCAACTTTATAAAGTTGTATGTTTTATCTTCATTAA 840722 Query 76260 CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCAT 76319 ||||| |||| | ||| || || |||| ||||||||| || || |||| || | | Sbjct 840723 CAAACCTATTCAAAGCAATTGAAGCTAAATTACAAACAGCAACTTCATCTGCTGAAGTGT 840782 Query 76320 ATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGC 76379 ||| | || || ||||| | |||||| || || || || |||||||||| ||| || | Sbjct 840783 ATTCCACAATTTCGGTGCACAAATTACTGCATTTTATGGTGCCAAGATTTTTTTGATTAC 840842 Query 76380 TCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATT 76439 | ||| | |||||||| || ||||| || | | || || || ||||| | |||| || Sbjct 840843 TTTTTCTATTACATGAATCTTTATACAGCATGTATGGTGTGCCCGTTTCCACTTGTGCTT 840902 Query 76440 CGATAATAGATTTCCAGACGACTCTAGCT-----TTTATTATAGATTTGTATCGCTTCTC 76494 | || || | |||||| | || |||| || ||| | | ||| || || Sbjct 840903 CTATTATTGCTTTCCACAGTTCTTGAGCTCGGACTTGCTTA-ACA----AATCTTTTTTC 840957 Query 76495 TCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554 |||||||| | ||| || ||||||||| ||||||||| |||| | | ||| || Sbjct 840958 CTGTTCATATTTTTCATACAATGCTTCAAATTCTTCTCCCCAACAATCAGCAAGACCGGG 841017 Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614 || |||| |||||||| | |||| |||||| | || ||||||||||| | Sbjct 841018 GCAATCATGAGGACACATTAGACTCCACATTTCATCTTTTTCTACACGTTTCATAAATAA 841077 Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674 ||| || ||||||| || ||||| |||| | || ||||| || || ||||| Sbjct 841078 ATCTGGGATCCATAAGGCGTAAAATAATTCTCTAGCTCGGACCTCTTCTTTGCCAGTATT 841137 Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734 |||||| ||||||| ||||| | || |||||| ||||| ||||| || || || || | Sbjct 841138 CTTTTTCAGATCTAAAAACTCAAAAACATCAGAGTGCCAAGGTTCAAGGTAAATAGCAAA 841197 Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794 | |||||||||||||| ||||| || || | ||| ||||| || ||||| || ||||| Sbjct 841198 TGCTCCCGGTCGTTTATTGCCTCCTTGGTCGACATACCTGGCTGTATTATTGTACACTCT 841257 Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854 ||||||||| | | ||| || || ||||| || |||| || || | || ||| Sbjct 841258 CAACATTGGCACGAGGCCATTGGAAACTCCATTAGTACCAGCTATGTAGGTACCTTTTGC 841317 Query 76855 ACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG 76914 | || | || | |||||||| || || || ||| ||||||| ||||| | Sbjct 841318 CCTGATGCAATGAACATGAAGGCCTATACCACCAGCAGATTTTGAGATTAAGGCACATTG 841377 Query 76915 TTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 ||| | ||||||||| || ||||| || |||||||| |||| | ||| || || Sbjct 841378 TTTTAGTGTGTCATATATACCCTCAATGCTATCATCTTTCATAGCTATAAGGAAGCAAGA 841437 Query 76975 AGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCA 77034 ||| | ||| | |||| |||| || ||||| ||| |||||||| || | Sbjct 841438 AGATAATTGTGGTCTTGGAGTTGCTGCTGAGAATAATGTGGGACTGGCATGAGTAAAATA 841497 Query 77035 TTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTC 77093 ||||||||| | | |||||| |||||||| ||| || || || || | || |||| Sbjct 841498 TTTTTCAGATAACAAATTGTAAGTTTCAATGGCTGAATCAATGTCTTCACCG-TGGATTC 841556 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCT 77138 | | | ||| ||||||| |||||||||||||| ||| || ||| Sbjct 841557 CAATCGAGACTCGCATCAGCATATGCTGAGGTCTTTCAGCAATCT 841601 >seq48068 Length=254185 Score = 132 bits (146), Expect = 7e-26 Identities = 136/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 46895 TAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCT 46954 ||| ||||||||| || || | ||||| || || || | ||||| ||||| || | Sbjct 224871 TAATATATGTATCAATCAACAAGGAGTACATCTCAGAGTGTACATTTTCCATAGCGATTT 224812 Query 46955 GAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACA 47014 ||||||| ||||| | ||||||||| || || || ||| ||||||| || | Sbjct 224811 GAAATCCATAAAAGAACCTTGCTTCACCGATTTGAACTTCTTGTGAAAATCGCTCTACTA 224752 Query 47015 AATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||||||| ||||| |||||| |||||||||||||||||| |||||||||||||| Sbjct 224751 AATTCTCATTTACTATACCATCAGAAGCAGCAAAAAATGCCAACACATGTTTAATAAA 224694 >seq63168 Length=2713828 Score = 102 bits (112), Expect = 1e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 169552 CCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTAAAAAATTTCCATCTGGG 169611 |||||||| || ||| | || | || || | | ||| | || |||| |||| ||| Sbjct 1029513 CCTATGTTAGCTGAAGCGTGTAAGTCGGTAGAAATGGCTATGAAGAAATGTCCAAATGGA 1029454 Query 169612 ATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTCATAAAAATAATAACAAC 169671 |||||| ||||| |||||||||| || || |||||||||||||||| | | | Sbjct 1029453 ATGTTTTCAGAAATCAAATATGATGGAGAGAGAGTGCAAGTTCATAAGAGAGGTTCGGAA 1029394 Query 169672 TTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTTACCACATAAAGTTGATTATCTCAAA 169731 ||| | |||| | || | | ||||| ||| | |||||||||| || || |||| Sbjct 1029393 TTTAAATACTTTTCTCGAGCTTTAAAACCTGTTATGGCACATAAAGTCAATCATTTCAAG 1029334 Query 169732 GAATACCTTCCTAAAGCATTT 169752 ||||| |||||||| |||||| Sbjct 1029333 GAATATCTTCCTAAGGCATTT 1029313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712371297675840