Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20machaon_20[refseq_20GCF_5F001298355.1_202015-09-28] 63,187 sequences; 278,436,446 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq61578 132 1e-25 seq48925 107 4e-18 seq51658 93.3 1e-13 >seq61578 Length=3623949 Score = 132 bits (146), Expect = 1e-25 Identities = 155/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || |||||||||||||||| | || | ||||| || | Sbjct 3476181 CAAG-TGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGTGTACGACCATCCTCCA 3476123 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| |||||||||||||| | |||||||| | | ||| ||||| || ||||| | Sbjct 3476122 ACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGGA 3476063 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| || |||| | |||||||| || ||||| || || || || || | Sbjct 3476062 TTTTAGCTTTAACGTTCTCCATAGTGTCTGAAGGTTCAACTTCGAGGGTGATGGTCTTTC 3476003 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | |||||| ||||||| |||||| Sbjct 3476002 CTGTTAAAGTCTTGACGAAGATCTGCAT 3475975 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || || ||||||||||||||||| || || | || || | Sbjct 3475965 GAGACGGAGTACCAAGTGGAGTGTCGACTCTTTTTGGATGTTATAGTCTGATAGTGTACG 3475906 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | ||| |||||||||||||| | |||||||| | | ||| ||||| Sbjct 3475905 ACCATCCTCCAACTGTTTGCCGGCGAAGATAAGACGTTGCTGGTCTGGGGGGATACCTTC 3475846 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || ||||| ||||| ||| || |||| | ||||||| || ||||| || || Sbjct 3475845 TTTGTCTTGGATTTTAGCTTTAACGTTCTCGATAGTGTCTGAGGGTTCAACTTCGAGGGT 3475786 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || | ||||| ||||||| |||||| Sbjct 3475785 AATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 3475747 Score = 116 bits (128), Expect = 9e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| || || |||||||| || |||||||| || | || || | Sbjct 3474202 GAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAATGTGCG 3474143 Query 151946 CCCATCTTCTAGGCTTTTC-CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || || ||| ||||||||||| | ||||||||| | | | ||| || | Sbjct 3474142 TCCATCTTCCAG-CTGTTCGCCGGCGAAGATCAATCTCTGCTGGGCTGGGGGGATGCCCT 3474084 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| ||||| || || || ||| | || | |||| ||| ||| || || | | Sbjct 3474083 CCTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAAGGCTCCACCTCTAAGG 3474024 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || || |||||||| | ||||||||||| | ||||||||| Sbjct 3474023 TGATGGTCTTGCCCGTCAAGGTCTTCACGAAAATCTGCATTTT 3473981 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| || || |||||||| || |||||||| || | || || | Sbjct 3474430 GAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAATGTGCG 3474371 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| ||||||||||| | ||||||||||| | | ||| || || Sbjct 3474370 TCCATCTTCCAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTC 3474311 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || ||| | || | |||| || || ||||| | || Sbjct 3474310 CTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAACTTCTAATGT 3474251 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || | ||||| || |||| |||||| Sbjct 3474250 GATGGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474212 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| || || |||||||| || |||||||| || | || || | Sbjct 3474658 GAGGCGGAGTACTAAATGCAGGGTTGACTCTTTCTGAATGTTGTAGTCAGACAATGTGCG 3474599 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | ||| ||||||||||| | || |||||||| | | ||| || || Sbjct 3474598 TCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGGATGCCCTC 3474539 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || ||| | || | |||| || || ||||| | || Sbjct 3474538 CTTGTCTTGGATCTTGGCCTTAACATTTTCAATTGTGTCCGAGGGTTCAACTTCTAATGT 3474479 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| || |||| |||||| Sbjct 3474478 GATGGTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 3474440 >seq48925 Length=1097090 Score = 107 bits (118), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || || ||||||||||| |||| || || | |||||||||| Sbjct 515383 CAAG-TGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGACAACGTACGTCCATCTTCTA 515325 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| ||||||||||| | || ||||| || | | || || || || ||||||| Sbjct 515324 ACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGGAATGCCCTCTTTGTCTTGAA 515265 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | |||| || || || || | || || ||||| | Sbjct 515264 TTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAACCTCTAACGTTATGGTTTTAC 515205 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||||| || || ||||||| ||||||| Sbjct 515204 CCGTGAGGGTTTTTACGAAGATCTGCATT 515176 >seq51658 Length=184250 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 151979 CCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTAC 152038 |||||||||||||| | |||||| ||||| |||||||| || ||||||| | || | Sbjct 30423 CCTCTGCTGGTCCGGAGGGATTCCCTCCTTATCTTGAATCTTGGCTTTGACATTTTCGAT 30364 Query 152039 GCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGAC 152098 | |||| || || || || || || || ||||| |||||||| || |||||||| | Sbjct 30363 GGTGTCCGAGGGTTCAACCTCGAGGGTGATGGTTTTCCCCGTGAGGGTTTTCACGAAAAT 30304 Query 152099 CTGCATTTT 152107 |||||| || Sbjct 30303 CTGCATCTT 30295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152886685790477