Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq348 102 8e-17 >seq348 Length=4065129 Score = 102 bits (112), Expect = 8e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | ||||| ||||| || || | ||||| || ||||||| |||||||| | Sbjct 3297246 GGTCTCTGATATAAGTATCTATCAGCAATGAATACATCTCAGAGTGTACATTCTCCATAG 3297187 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 | || || |||||||||||| | | ||||| | ||||||||||| | ||||| | Sbjct 3297186 CAATTTGGAATCCGTAAAAGAACCTTGCTTCACCAATTTGAACTTCTTGTGAAAATCGCT 3297127 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | |||||||| || || || || ||| || || ||||||||||| | ||| || | Sbjct 3297126 CTACCAGATTTTCATTAACAATACCATCGGAGGCAGCAAAAAACGCCAAGACATGTTTTA 3297067 Query 17406 TGAAAT 17411 | |||| Sbjct 3297066 TAAAAT 3297061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517520537854320