Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq348 96.9 4e-15 >seq348 Length=4065129 Score = 96.9 bits (106), Expect = 4e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| ||||| ||||| || ||||| || ||||||| ||||| || || || || Sbjct 3297238 ATATAAGTATCTATCAGCAATGAATACATCTCAGAGTGTACATTCTCCATAGCAATTTGG 3297179 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 ||||| || ||| | | || || | ||||| ||||| ||||||| || |||| Sbjct 3297178 AATCCGTAAAAGAACCTTGCTTCACCAATTTGAACTTCTTGTGAAAATCGCTCTACCAGA 3297119 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAAT 16649 || ||||| || ||||| || ||||||||||||||||| | || || || |||| Sbjct 3297118 TTTTCATTAACAATACCATCGGAGGCAGCAAAAAACGCCAAGACATGTTTTATAAAAT 3297061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511389634757680