Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq447 111 1e-19 >seq447 Length=7652121 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 101530 TTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATA-TAA 101588 || ||| |||||||| | ||||| |||| |||| || ||||| || |||| ||||| ||| Sbjct 7112882 TTTTTATACAGCCATTTCCATTTCAATTTTAGGATGAGGGTTGTAATTTT-TAATAATAA 7112940 Query 101589 TGTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAA 101648 || || ||| || ||||||||| || || || | ||||||| ||||||||||| Sbjct 7112941 AATCTTCATATTTGAAATCATCAATGGATTCAATTTTCCGAGCAAATTCAAGTGTTGGAA 7113000 Query 101649 ACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGT 101708 | ||| | || ||| | || || |||| | | ||||| |||| || ||| || | Sbjct 7113001 AGGGTTTTGGTTTTCTCTCTAATTGTTTTTTTAATGGTTCAATATGATTTAAATAAATAT 7113060 Query 101709 GAGCATCTCCTATAGTATGGATAAACTCTCCAG 101741 ||| ||| ||| | || || | |||||| |||| Sbjct 7113061 GAGTATCACCTGTCGTGTGCACAAACTCACCAG 7113093 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || ||||| ||||||||| || |||| || || || ||||| ||||||||||| || Sbjct 7113766 GTAACATGTGCAATCATGTGTGTCAAAAATGAGTAACTGGCAATATTAAATGGCACACCC 7113825 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACAT-A 101871 || |||||||| || || ||||||| | ||| | ||| ||||| |||| Sbjct 7113826 AATCCCATATCTGCACTCCTCTGATACATTAAGCAGTTCAACTTGCCATCCTCAACATGG 7113885 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCA 101931 || | ||| || | ||| ||||| || | | |||||| | | ||||| ||||| Sbjct 7113886 AACTGGACCAAACA-ATGGCAAGGAGGTAGCGCCATTTGACTGAGATCTGATGGGTTCCA 7113944 Query 101932 AGCACACATTAACATCCTTCTATC 101955 |||||||||| ||||| ||||| Sbjct 7113945 TGCACACATTATCATCCGCCTATC 7113968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361234143750374