Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq359 98.7 2e-15 >seq359 Length=3483218 Score = 98.7 bits (108), Expect = 2e-15 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 189402 ATATATATTCCATTA-AACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCG 189460 |||| ||| | |||| || |||| | ||||| |||||||||||| || |||||| | Sbjct 2597435 ATATTTATAC-ATTAGAAAAACTAGCTAAAGCAGAAACTCATGATGAACTGTGGAACTCC 2597493 Query 189461 TCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCT 189520 ||||| | |||||||| | ||||| || |||||| ||| | | ||||||| |||| Sbjct 2597494 GCACAACTACAGATGGTAAATGAAGGCAAGATGCATGGTTCTATCAGAATGTACTGGGGA 2597553 Query 189521 AAGAAGATACTTGAATGGACTAGAACACCTGAAGACGC 189558 |||||||| || |||||||| || || ||||| || Sbjct 2597554 AAGAAGATTCTAGAATGGACACCAAGTCCGGAAGATGC 2597591 Score = 96.9 bits (106), Expect = 6e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 189428 AAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGA 189487 ||||| |||||||||||| || |||||| | ||||| ||||| | || | |||||| Sbjct 2607122 AAAGCAGAAACTCATGATGAACTGTGGAACTCTGCACAACTGCAGCTCGTCAAAGAAGGC 2607181 Query 189488 AAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACA 189547 || |||||| | ||| | || ||||| ||| |||||||| || |||||||| | Sbjct 2607182 AAGATGCATGGCTTTCTTCGTATGTACTGGTGCAAGAAGATTCTAGAATGGACGCCGAGT 2607241 Query 189548 CCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG 189607 || ||||| || | | ||| || |||||||| | | ||| |||| |||| Sbjct 2607242 CCAGAAGATGCGCTTAAATATGCAATATATTTGAATGATCATTACAGCATAGATGGCAGA 2607301 Query 189608 GATCCTAACGGATACGTAGGT 189628 |||||||| |||| || ||| Sbjct 2607302 GATCCTAATGGATTTGTTGGT 2607322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923152094194960