Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq593 93.3 6e-14 >seq593 Length=2014934 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||||||| | | || || || | |||||||||||| || || ||||||| Sbjct 755371 TTCCTCCTCTAAGACGGAGCACTAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAATCTG 755430 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | || | | ||| || | ||||| |||||||| |||||||| ||||| || || | Sbjct 755431 ACAATGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGGG 755490 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| ||||| Sbjct 755491 GAATGCCTTCTTTGTCTTG 755509 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| || | | |||||| || | || ||||| || || || || || ||| Sbjct 754917 CCACCTCGCAGACGGAGTACCAAGTGAAGTGTTGATTCCTTTTGGATGTTGTAGTCAGAA 754976 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | || ||| |||| ||||| |||||||| |||||||| ||||| || || || Sbjct 754977 AGGGTACGGCCATCCTCTAGCTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGG 755036 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||||||||| || Sbjct 755037 ATACCTTCTTTATCCTG 755053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743490394734080