Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq348 102 8e-17 >seq348 Length=4065129 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16479 AATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTG 16538 |||||| ||||||| ||| |||||||||||||| || || |||||| || | Sbjct 3297264 AATAATACCTTTCTTTAGGGTCTCTGATATAAGTATCTATCAGCAATGAATACATCTCAG 3297205 Query 16539 AATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTA 16598 | || | ||||||||| || || || || || |||||| | || ||||| ||||| | Sbjct 3297204 AGTGTACATTCTCCATAGCAATTTGGAATCCGTAAAAGAACCTTGCTTCACCAATTTGAA 3297145 Query 16599 CTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAA 16658 |||| |||| | ||| | | ||||| ||||| || |||||| || ||||||| Sbjct 3297144 CTTCTTGTGAAAATCGCTCTACCAGATTTTCATTAACAATACCATCGGAGGCAGCAAAAA 3297085 Query 16659 ACGCAAGTATGTGTTTAATAAAAT 16682 |||| | | ||||| ||||||| Sbjct 3297084 ACGCCAAGACATGTTTTATAAAAT 3297061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462489602856400