Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq348 86.0 5e-12 >seq348 Length=4065129 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 13395 AATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454 |||||| |||| ||| |||| |||||||||||||||| || |||||| || | Sbjct 3297264 AATAATACCTTTCTTTAGGGTCTCTGATATAAGTATCTATCAGCAATGAATACATCTCAG 3297205 Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514 | || | ||| ||||| || |||||||| || ||||| | || || || | |||| Sbjct 3297204 AGTGTACATTCTCCATAGCAATTTGGAATCCGTAAAAGAACCTTGCTTCACCAATTTGAA 3297145 Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574 |||| |||||| ||| | | ||||| ||||| || || || |||||||||| Sbjct 3297144 CTTCTTGTGAAAATCGCTCTACCAGATTTTCATTAACAATACCATCGGAGGCAGCAAAAA 3297085 Query 13575 aaGCAAGTATGTGCTTAATAAA 13596 | || | | || || ||||| Sbjct 3297084 ACGCCAAGACATGTTTTATAAA 3297063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430962051435348