Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq559 116 6e-22 seq414 98.7 2e-16 >seq559 Length=2556913 Score = 116 bits (128), Expect = 6e-22 Identities = 187/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| || |||||||| | | || |||||||| || ||||| || || || || || || Sbjct 455596 CGCGAAACGTCATCGAAAAGTACTGCGAGATAATATTCAAGGTATAACAAAACCTGCCAT 455537 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || | |||| || || |||||||| ||| | | ||||| || | || ||||||| Sbjct 455536 ACGAAGATTGGCACGACGCGGTGGAGTGAAGAGAATATCTGGTTTAATTTACGAAGAGAC 455477 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | |||||||| | ||||| ||| || || | ||| || | ||||| || Sbjct 455476 AAGAGGAGTTTTGAAAGTTTTCCTTGAGAATGTGATTCGTGACGCAGTAACGTATACTGA 455417 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 || || || | ||||||||||| | ||||| |||| |||||| | || || || || Sbjct 455416 ACATGCGAAGAGAAAGACTGTCACAGCAATGGACGTCGTGTATGCACTAAAGCGACAGGG 455357 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | | |||||||||||| |||||| Sbjct 455356 CAGGACTTTGTATGGTTTTGGAGGTTAAT 455328 >seq414 Length=1262347 Score = 98.7 bits (108), Expect = 2e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | ||||| ||||||||||| || ||||| ||||| || ||| Sbjct 157 GCGAAGCGTCACAGGAAAGTACTTCGTGATAACATCCAGGGTATCACGAAGCCTGCCATC 98 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||||| ||||| | || || || |||||| |||| || || | ||||| || | | Sbjct 97 AGACGTCTCGCTCGAAGAGGCGGCGTGAAGCGTATCTCCGGTCTGATTTATGAGGAAACT 38 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCC 16589 || | || |||||| | |||||| ||| ||| |||| Sbjct 37 CGCGGCGTGTTGAAGGTGTTCCTCGAGAACGTGATCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071657974682