Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3650 232 6e-56 seq2316 122 7e-23 >seq3650 Length=1334389 Score = 232 bits (256), Expect = 6e-56 Identities = 582/878 (66%), Gaps = 15/878 (2%) Strand=Plus/Minus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || ||||||||||| |||||| | | || |||||| | || || || | Sbjct 961510 GCATACTTCGTAGAATGGGGTGTGTACCCGAGAAAATTCCCAGTCGATCGTGTTCCAATT 961451 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 || || || | ||| | | ||||| || ||||| |||||||| || || || | ||| Sbjct 961450 CCTAACCTGACTCATTTACTATACGGCTTCATTCCAATTTGCGGTGGAGATGGCATCAAC 961391 Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356 || | | ||| ||| |||||||| | || || || | ||||||| ||||| Sbjct 961390 GACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCTCTTCAGAGATCGTGCAGCGGCCGA 961331 Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416 | ||| || || || | |||||||| ||||||||||| | || ||||| |||||||| Sbjct 961330 GAAGATTTCAAAGTATCTATTCACGATCCTTGGGCCGCTCTTCAGAAACCACAGAAGGGA 961271 Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476 ||||| | ||||||||||| |||||||||||||||||||| ||||| | ||| Sbjct 961270 TTGTCTTCCTGGAACGAACCTTACAAAGGCAACTTTGGCCAGCTGATGTCTCTCAAACAA 961211 Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTT 32536 || | ||| | | || || |||| || || || || ||||| | | |||||||| Sbjct 961210 GCCAGGCCTGAACTTAAGATCCTACCTTCCATCGGTGGTTGGACACTAGCCGATCCCTTC 961151 Query 32537 TATTTTATGCA-CGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTT 32595 | | || | || |||| ||| || | | || || ||||| || ||||| || | Sbjct 961150 T-TCTTCTTCACCGACAAGGAGAAGAGAGATCGCTTCGTTGATTCTGTAAAAGATTTCCT 961092 Query 32596 ACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGG 32655 | ||||| ||||| || || || ||||| |||||||| ||||| || || || || Sbjct 961091 CTTGACCTGGAAGTTCTTCGATGGTGTTGACATCGATTGGGAATTCCCTGGAGGTAAGGG 961032 Query 32656 TGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTACA 32715 || ||||| | ||||||| | | | |||| | ||| || || | | Sbjct 961031 AGCTAACCCCGACCTCGGTAGCCCGAA---AGACGGAGATGTTTACGTTGAATTAATGAA 960975 Query 32716 AGAATTGCGTTCTATGCTGGACGACCTTCAATTGCAAACGGGCAAAACGTACGAGTTGAC 32775 ||||||||| ||| || |||||||| | || || || | |||||| |||| Sbjct 960974 GGAATTGCGTGAAATGTTGAACGACCTTTCTGAAGAGACCGGTAAGAAATACGAGCTGAC 960915 Query 32776 TAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATA---TGAAGCCGCGCA 32832 ||| || ||||| || || || || || || | || |||| || || Sbjct 960914 CTCCGCTATCAGTGCTGGATGGGATAAGATCCAAGTTGTCGATTACAGTGAA---GCTCA 960858 Query 32833 AAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAACAC 32892 |||||| | || | || || || |||||||| || |||||||| || ||||||||| Sbjct 960857 AAAGTATATGGACCATATCTTCCTTATGAGTTATGATTTTAAAGGCGCCTGGTCTAACGA 960798 Query 32893 CGATTTGGGCTATCAGA--CCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATTGTAC 32950 | | || |||||| |||||| ||||| || |||||| || | ||| || Sbjct 960797 CACCCTCGGTCATCAGACTCCACTT--TACGCACCCGCTTGGAACCCTAAGGAAACTTAT 960740 Query 32951 ACCACAGATCACGCTGTTAAATTGTTAACAAGTCAAGGTGTAGCTTCTTACAAAATCATT 33010 ||||| || | ||| |||| || |||||| || || | || || | Sbjct 960739 ACCACTGACTTTGGTGTGAAATATTTGCTTGCTCAAGGCGTGAACCCTAAGAAGATTGTG 960680 Query 33011 GTCGGCATCGCCATGTACGGTCGCGGGTGGACGGGCGT 33048 || ||| | || |||||||| ||||| ||||| || || Sbjct 960679 GTGGGCGTAGCTATGTACGGACGCGGCTGGACTGGTGT 960642 >seq2316 Length=6356476 Score = 122 bits (134), Expect = 7e-23 Identities = 175/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 115269 TTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCG 115328 ||||| | || | || |||||| || || || ||||| |||||||| |||||||| || Sbjct 2659328 TTTATTACAGTTCAACAATGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATAACGT 2659387 Query 115329 TCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAG 115388 | || || || |||||| ||| | | |||||| |||||| || ||||| | Sbjct 2659388 TAGAGGTTGAAGCCTCTGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGG 2659447 Query 115389 GCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAA 115448 || | ||| ||||||||||| | || | || |||||||| |||||||||| | Sbjct 2659448 GCATTCCCCCAGATCAGCAAAGGTTGATCTTCGCCGGCAAACAGTTAGAAGATGGACGTA 2659507 Query 115449 CCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAG 115508 | || |||| || ||||| || || || || || | || |||||||||| |||||| Sbjct 2659508 CATTGTCCGACTACAACATCCAGAAGGAATCAACACTTCACTTGGTGTTGAGGCTGCGAG 2659567 Query 115509 GAGGAAA 115515 |||| || Sbjct 2659568 GAGGTAA 2659574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425323917648880