Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2316 320 1e-82 seq3650 262 3e-65 seq593 140 3e-28 seq1964 125 6e-24 seq802 86.0 5e-12 >seq2316 Length=6356476 Score = 320 bits (354), Expect = 1e-82 Identities = 1118/1725 (65%), Gaps = 40/1725 (2%) Strand=Plus/Plus Query 128776 GACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATG 128835 || ||||| || || || | |||||| | || || ||||| | || ||||| ||||| Sbjct 2965194 GATTTGTCAACCGTGAACTGAATAGCATTAGCAGCAGGCTTTATACGTAAATAATACATT 2965253 Query 128836 CCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTG 128895 |||||||||||||| ||||||| | || | |||||| | ||||| | | || | Sbjct 2965254 CCTGTTTTCAAACCCATTTTCCATGCGTAAAAGTGAATTGATGTCAATTTTCCATAATTC 2965313 Query 128896 GGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCA 128955 |||| | || | ||| ||||| ||||||||||| || ||||| | || ||||| ||| Sbjct 2965314 GGTTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTATAAATGCACCTCGATCAGCA 2965373 Query 128956 GCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACG 129015 ||||| ||| | |||| || || ||||| || ||||| || | ||||| | | Sbjct 2965374 GCCATTTTAATTGTAGTTTTAACAGAAATCTCCCAAACTGTTTTATACAATTCTCTAATG 2965433 Query 129016 TGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGC 129075 | |||||||| || || || || | | || ||||| ||| || ||| | Sbjct 2965434 TCCTTTGGTATACGCTCGATATTTTGAATGGAACCATTGTTGTGAATTATCAGATTTTTC 2965493 Query 129076 ATCTGTTCGTTGTACAAATTCAGTTTG-ATCAAATCGTCG-GTCAAGTATTTGTTTATTA 129133 || | |||| | ||| || | || |||| || ||| ||| | | ||| | | Sbjct 2965494 ATGTCGTCGTCCCATAAA-TCTGCCTGCGTCAAGTC-TCGCAACAAATGATGGTTAACAA 2965551 Query 129134 CTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACG 129193 | || || || || | |||||| || | ||||||||| || || || ||||| | Sbjct 2965552 CCTGGAATTCCCCAGACAAAACACGTCTTTGGTAAATGTTTGATGTAAATGGTTCAAAGG 2965611 Query 129194 ATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCG 129253 |||||||||| || || ||||| || || | ||| || ||||| ||| | |||||| Sbjct 2965612 ATTCATTGTTTCCCAAGATTTGGGCTGTAGACGCTGTAGGCATTGGAGCTAATAAAAGCG 2965671 Query 129254 AGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGAT- 129312 | || |||| || || | ||| | || |||||| | ||||||||| | ||| Sbjct 2965672 AATTGCGCAGCCCATGTTTGGCAATTTTTTCTTTTAAAACAGACCAGTCCCAGA--GATC 2965729 Query 129313 -GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAA 129371 | || || | || ||||| ||| |||||||| || || || || ||||| Sbjct 2965730 AGATGGAGTTTTATCCCACATGTCATATTGCAAAATGCCTTGGCTTGCTGGACTTCCTTC 2965789 Query 129372 GTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAA 129431 || | | | || || | || |||| ||||||||| ||||| ||||| || | Sbjct 2965790 ATATGTACTATAAACTCCTTCTCTTTGCGCCAGTTCGCAACTGGCTTCTAATGCTCCGTA 2965849 Query 129432 ATAAATTGTTTCGGCAATT--TTGGT---GTTCAACACTTTGGCCTGGTCGCTTTCGTAC 129486 ||| || |||||| ||| ||||| ||| || | |||| ||| ||||| || Sbjct 2965850 ATATATCGTTTCGAAGATTTGTTGGTTAAGTTTAA-----TTGCCTTGTCACTTTCATAA 2965904 Query 129487 GGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGA 129546 || || |||| || ||||||| || || || ||||| | || | || || |||| Sbjct 2965905 GGAATGCGCATCAGAACAAATGTATCAGCTAACCCTTGCACTCCAATCCCAATTGGTCTG 2965964 Query 129547 TGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTG 129606 || | ||||| || | ||| || || || | || | || |||||||| Sbjct 2965965 TGGCGCATGTTGGAATTCTTTGCTTCTGGCACTGGGTAAAAATTAACATCAATAATTTTA 2966024 Query 129607 TTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCT 129666 || | || | | || || || || | | | ||| || ||| ||||| | Sbjct 2966025 TTAAGGTTTTGTGTGATTATCTTTGTGACTTCTCTCAACTTTGTAAAGTTGTA---TGTT 2966081 Query 129667 ACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCG 129726 ||| | ||||| || | | ||| || || ||||| || || ||| ||| Sbjct 2966082 TTATCTTCATTAACAAACCTGTTCAAAGCAATAGAAGCTAAATTACAAACAGCAACTTCA 2966141 Query 129727 TTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAA 129786 | | | |||| || |||||||| | |||||||||||| |||||||||||| | | Sbjct 2966142 TCTGCTGAAGTGTATTCAACAATTTCTGTGCACAAATTACTGCATTTAATGGTGCCAAGA 2966201 Query 129787 TGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTT 129846 | |||||||| ||||| |||| |||| |||||| || | ||| || || ||||| ||| Sbjct 2966202 TTTTTTTGATTGCTTTTTCTGTTACAAGAATCTTTATATAACATATATGGTGTGCCTGTT 2966261 Query 129847 TCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAAT 129906 || ||||| | ||| | || | | ||| ||| |||| || || | |||||| Sbjct 2966262 TCCACTTGTGCTTCTATGATTGCTTTCCACAGTTCTTGAGCTCGGACTTGCTTAACAAAT 2966321 Query 129907 TTGCCACATTTC----TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGT 129962 | | |||| || ||| | |||| | | |||||||||| || || || Sbjct 2966322 ----CTCTTTTCCTCTTCATATTGCCCATATAATGCTTCAAATTCTTCTCC-CCAACAGT 2966376 Query 129963 -GTCGAGCAACGGCG-ATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACT 130020 | | || | ||| | | ||| | || ||||| |||||||||||| |||| ||| || Sbjct 2966377 CGGCAAG-ACCGGGGCAATCATGAGGGCACATTAAACTCCACATTTCATCTTTTTCAACA 2966435 Query 130021 CGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCC 130080 || |||||||||||||| || | ||| | || || || | |||| ||| | || Sbjct 2966436 CGCTTCATAAACAAATCTGGGATCCATAATGCATAAAATAGTTCTCTGGCTCTGACTTCT 2966495 Query 130081 TCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCA 130140 || || | || |||||| || | || || | | || | |||||| ||||| Sbjct 2966496 TCTTTGCCAGTATTCTTTTTCAGATCTAAAAACTCAAACACATCAGAGTGCCAGGGTTCT 2966555 Query 130141 ACATAAATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGCGCACGGCA 130197 | ||||| || | ||| || ||| ||||| ||||||||||| | | | | | Sbjct 2966556 AAGTAAATAGCAAATGCACCTGGTCGTTTGTTGCCTCCTTGGTCAACATACCTTGCTGTA 2966615 Query 130198 TTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATG 130257 || ||||| ||||||||||||| | | || |||| ||||| || | | || Sbjct 2966616 TTATTGTACACTCGCAACATTGGTACAAGACCATTGGATACACCGTTAGTACCTGCTATA 2966675 Query 130258 AAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGAT 130317 || | || || | || |||||| ||| || ||||| || | ||||||| Sbjct 2966676 TAAGTACCTTTTGCTCTAATACAATGAACATGTAGTCCAATGCCACCAGCTGATTTTGAG 2966735 Query 130318 ATCAACGCGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTT 130377 || || || || | ||| || ||||| || || | || ||||| ||||| || | Sbjct 2966736 ATTAATGCACATTGTTTTAGTGTGTCATATATACCTTCAATGCTGTCATCTTTCATAGCT 2966795 Query 130378 AGGAGGAAACACGAGGCCAATTGGGCGTAACATGATCCGCTG--GCAAACAAAGTTGGAC 130435 | |||||| || || | |||||| | || | || |||| | || || || |||| Sbjct 2966796 ATGAGGAAGCAAGAAGACAATTGTG-GTCTC-GGAGTTGCTGCAGAGAATAATGTGGGAC 2966853 Query 130436 TTGCATGTGTATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480 | ||||||||| | ||| | | || || ||||| ||||||| Sbjct 2966854 TGGCATGTGTAAAGTATTTTTCAGACAATAAGTTGTAGGTTTCAA 2966898 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| | || |||||||| | || | || || ||| || | Sbjct 2659345 ATGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAAGCCTCT 2659404 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| |||||||||||||| ||||| ||||| || ||||| Sbjct 2659405 GACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCCCCAGATCAG 2659464 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | | || || ||||||||||||||||| ||| || || | ||||| |||||| Sbjct 2659465 CAAAGGTTGATCTTCGCCGGCAAACAGTTAGAAGATGGACGTACATTGTCCGACTACAAC 2659524 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || ||||| || | || || || ||| | |||| |||||| Sbjct 2659525 ATCCAGAAGGAATCAACACTTCACTTGGTGTTGAGGCTGCGAGGAGGT 2659572 >seq3650 Length=1334389 Score = 262 bits (290), Expect = 3e-65 Identities = 646/975 (66%), Gaps = 11/975 (1%) Strand=Plus/Plus Query 48738 CTATAGTCGACGACACCGTCCTCCCACGTCCCGGTAACGGGGCCGACGGCCACACCGCTA 48797 |||||||| || |||||||| | ||| || || | || || || || || | Sbjct 960555 CTATAGTCAACTACACCGTCTTGCCAAGTACCTTTGACTGGTCCAGTCGCGTTGCCAGTG 960614 Query 48798 AAGGGGTTATCGTCGCTGTAATCGAGGACACCGGTCCATCCGCGACCGTACATTGCCACA 48857 || || || | ||| ||||| | ||||| ||||| ||||| |||||||| || || Sbjct 960615 AATGGATTGTTGTCTTCGTAATTATGAACACCAGTCCAGCCGCGTCCGTACATAGCTACG 960674 Query 48858 CCCAATACAATTTTGTTGGGTCTCACGCGTTGGTCCAAAAGAGCATTCACCGCAAAATCC 48917 |||| ||||| || || || |||||| ||| | | | | ||||| |||| || Sbjct 960675 CCCACCACAATCTTCTTAGGGTTCACGCCTTGAGCAAGCAAATATTTCACACCAAAGTCA 960734 Query 48918 GTAGTGTAATGTTCGTTTACATTCCATTTCGGAGCATACAATGCCGTCTGGTGACCCAAA 48977 || || ||| ||| || ||||| || || || | || ||||| ||||| | Sbjct 960735 GTGGTATAAGTTTCCTTAGGGTTCCAAGCGGGTGCGTAAAGTGGAGTCTGATGACCGAGG 960794 Query 48978 TCAACATTCGACCAGGCACCCTTAAAATCGTAGTTCATTAAAAATATTTTATCTAAATAA 49037 | || |||||||| || |||||||| || |||| | || || | || | ||| Sbjct 960795 GTGTCGTTAGACCAGGCGCCTTTAAAATCATAACTCATAAGGAAGATATGGTCCATATAC 960854 Query 49038 TTTTGGGCATCGTTGTATTTAACCACGGCAATTTTGTCGTCGCCTGCGCTAATGGCGCTT 49097 ||||| || || |||| | || || || || || || || || || ||| Sbjct 960855 TTTTGAGCTTCACTGTAATCGACAACTTGGATCTTATCCCATCCAGCACTGATAGCGGAG 960914 Query 49098 GTTAATTCAAAATTACGGCCGGTTTCGCGTTCA---AGATCGTCGAGCATTTCGCGTAAT 49154 || | || | || ||||| || |||| || |||| | |||||| || ||| Sbjct 960915 GTCAGCTCGTATTTCTTACCGGTCTC---TTCAGAAAGGTCGTTCAACATTTCACGCAAT 960971 Query 49155 TCTTTCAAGAGAACAACATAAGTGTGTCCGTCGTGTTGCGAATCGCCCAACAACGGATTC 49214 || |||| | |||| ||| | |||||| || || || | || || Sbjct 960972 TCCTTCATTAATTCAACGTAAACATCTCCGTC---TTTCGGGCTACCGAGGTCGGGGTTA 961028 Query 49215 GCCCCTTTGCCGCCCGGAAATTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCAAGTT 49274 || || || || || || ||||||||||| ||||| || || ||||| || ||||| || Sbjct 961029 GCTCCCTTACCTCCAGGGAATTCCCAATCGATGTCAACACCATCGAAGAACTTCCAGGTC 961088 Query 49275 AACAAAAATTCGCGCACCGAATCTACAAACACGTCACGTTTATGCGCATCGTGCATAAAG 49334 || | || || || ||||| || || || | || | | ||| | ||| Sbjct 961089 AAGAGGAAATCTTTTACAGAATCAACGAAGCGATCTCTCTTCTCCTTGTCGGTGAAGAAG 961148 Query 49335 TAAAATGGATCGGACAACGTCCAACCCCCGATGGATGGCAATACTTTTAAATTG-GGATT 49393 | || ||||||| | |||||||| |||||||| || | | | |||| || || | Sbjct 961149 AAGAAGGGATCGGCTAGTGTCCAACCACCGATGGAAGGTAGGA-TCTTAAGTTCAGGCCT 961207 Query 49394 TGCTTTTTTAATTGCCATCAATTGACCGAAATTGCCTTTGTACGGTTCGTTCCAAGCGGA 49453 |||| ||| | | ||||| || || || ||||||||||| ||||||||||| | || Sbjct 961208 GGCTTGTTTGAGAGACATCAGCTGGCCAAAGTTGCCTTTGTAAGGTTCGTTCCAGGAAGA 961267 Query 49454 CACACCTTTTTGGGGTTTTTGCAGCGCAGCCCACGGATCGTGAATAGACACTTTGAAATC 49513 || || || || ||||| || || || ||||| |||||||||||||| ||||||||||| Sbjct 961268 CAATCCCTTCTGTGGTTTCTGAAGAGCGGCCCAAGGATCGTGAATAGATACTTTGAAATC 961327 Query 49514 GTCCCGGCCAGCGCAACTTTTTTGTAATGCCTCAAAACTGCCCGTTATCGTTTTCAAACT 49573 || ||||| ||| | | || | || | |||||||| ||| ||| || || Sbjct 961328 TTCTCGGCCGCTGCACGATCTCTGAAGAGCTTGGAAACTGCCTTCGATCTCTTTTAAGCT 961387 Query 49574 GTCGTTAATGCCGTCGCCCCCGCAAATTGGCACGAAACCGTACAGCAGATGCGATAGATT 49633 |||||| ||||| || || ||||||||||| | ||| ||||| || | ||| | || || Sbjct 961388 GTCGTTGATGCCATCTCCACCGCAAATTGGAATGAAGCCGTATAGTAAATGAGTCAGGTT 961447 Query 49634 TGGTGCGGGTACGCGATCGGCGGGAAACGATCGACCGTACACACCCCACTCGACAAAGTA 49693 || || || |||||| | || || || |||||||||||| || || ||||| Sbjct 961448 AGGAATTGGAACACGATCGACTGGGAATTTTCTCGGGTACACACCCCATTCTACGAAGTA 961507 Query 49694 CGCAGCGACAACTTT 49708 || | |||||||| Sbjct 961508 TGCTCCAACAACTTT 961522 >seq593 Length=2014934 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||||||||| |||| || || || |||| || || ||||| | | Sbjct 755371 ATGCAGATTTTTGTTAAAACGCTAACAGGAAAGACTATCACACTGGAGGTGGAGCCATCA 755312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| |||||||||||||||||||| ||||| || ||||| Sbjct 755311 GACACAATTGAGAATGTAAAAGCGAAAATTCAAGACAAGGAGGGCATTCCCCCAGATCAG 755252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || ||| | || ||| ||||| | || || ||||| Sbjct 755251 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCAGACTACAAT 755192 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||||| || | || || ||| | || || | ||||| Sbjct 755191 ATTCAAAAGGAATCGACGCTTCACTTGGTTCTTCGTTTAAGAGGAGG 755145 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| || || || || || || || |||| | || ||||| | Sbjct 755830 AAGATGCAGATTTTTGTGAAGACATTGACAGGCAAGACCATCACCTTGGAGGTGGAGCCT 755771 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | || ||| || |||||||||||||| ||||| || || Sbjct 755770 TCAGACACAATTGAGAATGTTAAGGCAAAGATCCAAGACAAGGAGGGCATTCCCCCAGAC 755711 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || ||||| |||||||| || ||| ||||| | ||||| || Sbjct 755710 CAGCAGCGTCTCATCTTCGCCGGTAAACAGTTGGAAGATGGACGCACATTGTCCGACTAT 755651 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| ||||| ||||||||| | |||||||| Sbjct 755650 AACATCCAAAAGGAATCCACCCTGCATTTAGT 755619 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || ||||| || || || || |||| | || || ||| | | Sbjct 755143 ATGCAAATTTTCGTGAAGACTTTGACAGGCAAGACCATCACCTTGGAGGTTGAACCTTCT 755084 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || ||||| || || || || || || ||||| || || || || Sbjct 755083 GATACCATTGAGAATGTCAAAGCCAAGATCCAGGATAAAGAAGGTATCCCCCCAGACCAG 755024 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||||||| |||||||| ||| ||| | || || |||||| Sbjct 755023 CAGAGATTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGTACCCTTTCTGACTACAAC 754964 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | || || || | || |||| || ||| Sbjct 754963 ATCCAAAAGGAATCAACACTTCACTTGGTACTCCGTCTGCGAGGTGGT 754916 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||||||||| | || || || || |||| | ||||| ||| || | Sbjct 754915 ATGCAGATCTTTGTTAAAACCCTGACAGGCAAGACTATCACATTAGAAGTAGAACCCTCG 754856 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||||||||| ||||| || || || || Sbjct 754855 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 754796 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||||||| |||||||| ||| ||| | || || |||||| Sbjct 754795 CAGAGATTGATCTTTGCTGGCAAACAGCTAGAGGATGGCCGTACCCTTTCTGACTACAAC 754736 Query 22399 ATTCAAAA 22406 || ||||| Sbjct 754735 ATCCAAAA 754728 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || || || || || || |||| | || || || | | Sbjct 755599 ATGCAGATCTTCGTTAAGACCTTGACAGGCAAGACTATCACATTAGAGGTTGAGCCATCT 755540 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| |||||||| || || ||||| || || || Sbjct 755539 GACACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCCCCAGACCAG 755480 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| ||||||||| | || ||| ||||| | || ||||||||| Sbjct 755479 CAGAGATTGATCTTTGCTGGCAAACAGCTTGAAGATGGACGCACATTGTCAGATTACAAC 755420 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || |||||||| || | || ||||| Sbjct 755419 ATCCAGAAAGAATCTACTCTTCACTTAGT 755391 >seq1964 Length=1360 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || ||||| |||| || ||||| ||| || | Sbjct 48 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAAACAATCACCCTAGAAGTTGAACCCTCG 107 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||||||||| ||||| || || || || Sbjct 108 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCAGACCAG 167 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||||||||| ||||| |||||| || || ||||||| |||||| Sbjct 168 CAACGTCTCATCTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACACTCTCCGACTACAAC 227 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | ||||| || | || | ||||| || Sbjct 228 ATCCAGAAGGAGTCTACTCTTCATTTGGTGCTTCGTCTCCGCGGCGG 274 >seq802 Length=1346568 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || ||||| |||| || || || ||| || Sbjct 833294 AAGATGCAGATTTTCGTGAAAACCCTCACGGGGAAAACCATCACCCTCGAGGTTGAACCC 833235 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | |||||| | || || ||||| ||||||||||||||| ||||| || || || || Sbjct 833234 TCGGATACCATTGAAAATGTCAAAGCAAAAATTCAAGACAAAGAGGGAATCCCTCCAGAC 833175 Query 22336 CAACA 22340 || || Sbjct 833174 CAGCA 833170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419708182804810