Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq2649 80.6 7e-12 >seq2649 Length=5679888 Score = 80.6 bits (88), Expect = 7e-12 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || ||||| | ||||||||| ||| | | | | |||| | ||||||||| Sbjct 561689 TGCACCTTCCACAAGTTCGGTCCTTCAGGCAGCATACAGACGCACGACAGCCTCTGCATC 561630 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478 || ||| |||| | ||||||||||||| ||||| ||| |||||||||||| Sbjct 561629 CTGCCGCTGAACATCGTCAACGAGAAGACTTACATCTTCATCTGGTTCTGGT 561578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479471199000