Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq447 82.4 7e-11 >seq447 Length=7652121 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || |||||||| |||| ||| | || || | || || |||||||| ||||| || || Sbjct 7113763 CCTGTAACATGTGCAATCATGTGTGTCAAAAATGAGTAACTGGCAATATTAAATGGCACA 7113822 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 ||||| ||||| ||| | ||||||||||| ||| | || || || | ||| Sbjct 7113823 CCCAATCCCATATCTGCACTCCTCTGATACATTAAGCAGTTCAACTTGCCATCCTCAACA 7113882 Query 20360 T-AAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGAC--AAGTCCGCCGGG 20416 | || | ||| ||||| || || || || |||||||| ||| | || | ||| Sbjct 7113883 TGGAACTGGACCAAACAA-TGGCAAGGAGGTAGCGCCAT--TTGACTGAGATCTGATGGG 7113939 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTT 20458 ||||| |||||||| || || | |||||| ||||||||| Sbjct 7113940 TTCCATGCACACATTATCATCCGCCTATCGGCTGGATTATTT 7113981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441351426522160