Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq336 480 6e-130 seq2205 224 7e-53 seq763 201 9e-46 seq1872 168 5e-36 seq3427 134 1e-25 seq303 107 1e-17 >seq336 Length=3672263 Score = 480 bits (532), Expect = 6e-130 Identities = 998/1466 (68%), Gaps = 31/1466 (2%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 || || || |||||||| || || | |||||||| || || |||||||| || || | Sbjct 247347 ACGTTGAGGATACCATTAGCGTCGATGTCAAATGTTACATCTATTTGAGGTACACCGCGA 247406 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCC---CAGATTATTATTATCTTTAGTG 517381 | |||||||| || || | || ||| ||||| |||||||||||| | | || Sbjct 247407 GGTGCAGGTGGTATACCAGTTAGATCAAAAGTTCCTAACAGATTATTATTCT---TGGTC 247463 Query 517382 AATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTT 517441 | | | |||||| || | | ||| || | || | | ||||||||| ||||| || Sbjct 247464 ATTGCCCTTTCACCTTCATACACTTGAATGTTGACAGCTGGTTGATTATCCGAATAGGTG 247523 Query 517442 GTAAATACTCTGG-ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCAT 517500 ||||| | ||||| | | | | ||||| ||| | | ||| | || | || || ||||| Sbjct 247524 GTAAA-AGTCTGGGAGTGTGTGCAAGGGATTTTAGCGTTGCGTTCGACTATCTTCGTCAT 247582 Query 517501 AATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT 517560 || |||||| |||||||| | ||| ||||| | || |||||||| |||| | | || Sbjct 247583 AACACCACCAGCTGTTTCAATACCTAGAGATAAGGGGGTGACATCGACTAAAAGCACATC 247642 Query 517561 TTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGC 517620 |||| || || | | || | || || || |||| ||||||||||| || Sbjct 247643 CTGAATCTTGGAATGACGCTCCCCGCTTAATATTGCAGCCTGAACTGCAGCACCATAAGC 247702 Query 517621 AACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT-GAAA 517679 ||||| ||||||||||||| || | ||| |||||||||||||| || |||||| | || Sbjct 247703 CACAGCCTCATCAGGATTAATAGATAAATTGAGTTTTTTACCATTAAAGAAATTTTGTAA 247762 Query 517680 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCT 517739 || || | | |||||| ||||||| ||| || ||||| | ||||| |||| | Sbjct 247763 TAAATTCTGA-ATCTTAGGTATACGAGTTGAGCCCCCAACCAGAACAATATCATTGATAG 247821 Query 517740 GTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAA 517799 ||| |||| ||| | ||| |||| |||| || || || || ||| | || Sbjct 247822 AGCTTTTGTCCATTTTGGCATCATTTAAAGCTTTCTCTACTGGCTCTAGAGTGATACGAA 247881 Query 517800 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGA-GTGACATTATAATCAATT 517858 | || |||| ||||| |||||| ||||| | || |||| | | | || || Sbjct 247882 ATAAATCTGCGTTTAGTTCCTCGAATCGTGCTCTTGAAATTCGTGAAAAGA-AGTCTATA 247940 Query 517859 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 517918 || ||| | | || ||| | ||| || | | || ||| ||||| |||| |||||| Sbjct 247941 CCCTCGTAAAGAGCATCGATTTCTATATTTGCTTCAGTACTGGAAGAAAGTGTTCGTTTA 248000 Query 517919 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGT 517977 || ||||| || || | | | || | ||| ||| | | |||| | |||| | Sbjct 248001 GCTCGTTCGGCAGCAGTGCGCAAGCGACGAAGTGCTCTTGG-GTTCGATTTGATATCTTT 248059 Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTA-CAAGACGATTATCAAAATCTT 518036 |||||| ||||| || || || ||| || | | |||| | | | ||| |||||||||| Sbjct 248060 TTTATACTTTCTTTTAAACTCGTCAGCA-AGAAAGTTAACTAATCTATTGTCAAAATCTT 248118 Query 518037 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 518096 |||| || | | ||| | ||| | |||||| |||||| ||||| | ||||| | Sbjct 248119 CACCACCAAGATGAGTGTCTCCGGCTGTAGCTTTTACTTCAAAAAGAGAACCTTCATCAA 248178 Query 518097 ACAAAAGAGT---TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 518153 | ||| | ||||||| || || || || | |||||| || | || || || Sbjct 248179 TCGTAAGGATGGATACATCAAAAGTACCGCCTCCTAAATCAAAGATTAAGACTTTGCGTT 248238 Query 518154 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 || | | || |||||||| || || || ||||| ||||| ||||| |||||||| | Sbjct 248239 CTCCTTTTAAATTCTTATCAAGGCCGTAAGCCAAAGCTGCAGCCGTTGGCTCATTAATTA 248298 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 518273 |||| | ||| || | || ||||| || ||||||||||| |||||||| || || | Sbjct 248299 TTCTGAGAACGTTTAATCCGGCAATAGCACCCGCATCTTTAGTAGCTTGTCTCTGAGAGT 248358 Query 518274 CGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGC 518333 | || || || ||||| || |||||||| || | |||||||| || || | ||| | Sbjct 248359 CATTGAAGTAAGCAGGTACTGTAATAACTGCTTTAGTTACTTTGTTGCCTAGATATGATT 248418 Query 518334 TTGCCGTTTGTTTCATTTTACTTAAAATCATTGATG-AAATTTGTTCTGGGG-----AAT 518387 || || | ||||||||| ||| | || || || | || ||||| | | | Sbjct 248419 CAGCTGTCTCTTTCATTTTTAGTAACACCA-TGCTGCTTACTTCCTCTGGAGTGAACACT 248477 Query 518388 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 518447 |||||| ||| ||| | | ||||||| || | ||||| | | || | || Sbjct 248478 TTTGCTT---TTCCTTT--AAACGATACTTGAATTTTAGGTTTCCCGTTATCGTTGACAA 248532 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 518507 ||||||| ||||| | || || ||| || ||| | | |||| | | | | |||| Sbjct 248533 CTTTAAAGGGCCAATGCTTTATGTCTTGCTGTACAGTAGGATCATCATACTTACGTCCAA 248592 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | || || || ||||| ||||||||||| || || || || | |||| |||||||| Sbjct 248593 TCAAACGCTTGGCATCGAAAATAGTATTATCAGGGTTCATGGCTACCTGATTTTTGGCTG 248652 Query 518568 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 518627 ||||||| || || |||| || || || || | |||||| || ||||||||||| || | Sbjct 248653 CATCTCCTATGAGCCGTTCGGTGTCAGTGAACGCAACATAAGACGGAGTTGTGCGGTTTC 248712 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 ||||||| || ||||| || || || ||||||| |||||| | || ||||| | | | Sbjct 248713 CTTGATCGTTTGCAATTATGTCTACGTTACCATGTTGCCACGCGCCCACACAGGAATATG 248772 Query 518688 TTGTTCCTAAATCAATACCAATAGCA 518713 ||||||| ||||||||||| | |||| Sbjct 248773 TTGTTCCCAAATCAATACCCACAGCA 248798 Score = 107 bits (118), Expect = 1e-17 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 ||||| || | |||||| || ||||| |||||||||||| | ||||| | ||| || ||| Sbjct 248262 CCGTAAGCCAAAGCTGCAGCCGTTGGCTCATTAATTATTCTGAGAACGTTTAATCCGGCA 248321 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || | | | ||| ||| ||||||||||| | |||||| || || || ||||| ||| Sbjct 248322 ATAGCACCCGCATCTTTAGTAGCTTGTCTCTGAGAGTCATTGAAGTAAGCAGGTACTGTA 248381 Query 322364 ATAACTGCTTTA 322375 |||||||||||| Sbjct 248382 ATAACTGCTTTA 248393 >seq2205 Length=3731788 Score = 224 bits (248), Expect = 7e-53 Identities = 526/779 (68%), Gaps = 25/779 (3%) Strand=Plus/Minus Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 517857 ||| || || ||||| | ||| || ||| ||||||||| || || || |||| || Sbjct 2070334 AAATAAATCCGAACACAATTCCTCAAATCGAGCTCTAGTTAGCTTGGAATAGAAATCTAT 2070275 Query 517858 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 517917 |||||| || | || | ||| || ||| || || ||||| |||| ||||| Sbjct 2070274 TCCTTCATGCAGGGCGTCTATTTCTATACTAGCTTCTGTATTCGAAGAAAGTGTTCGTTT 2070215 Query 517918 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATC 517974 ||| | ||| ||||| || || ||||||| |||| ||||| | ||||| | | | || Sbjct 2070214 AGCTCTTTCGCATGCAGTTCTCAGTCTTC-TAAGAGCTTTCG--GATTGCCAGTAATATT 2070158 Query 517975 TGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAAT 518033 | | ||| |||| | | || |||| | | | || | || | || | ||||||| Sbjct 2070157 TTTCTTAAATTTCCGTTCAAATTCTTGACTGAAATGATCT-ACCATTCGGCTGTCAAAAT 2070099 Query 518034 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 518093 | || ||||| | | ||| | |||| || | | |||||| ||| | | |||| Sbjct 2070098 CCTCGCCTCCAAGGTGAGTGTCACCTGCTGTTGATTTTACTTCGAACAATGATCCTTCTG 2070039 Query 518094 GAGACAAAAGAGTTACATCATGG---GTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 | | ||| | | | | | || ||||| || | ||||| || ||||||||| Sbjct 2070038 AAATCTGAAGTATCGAAACGTCGAAAGTACCACCGCCAAGGTCAAATATTAGTACATTCT 2069979 Query 518151 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 518210 | || | | | ||| || | ||||| || | ||| || || |||||||| |||| Sbjct 2069978 TCTCACCTTTTAAATCTTTGTCTAAGCCATAAGCGAGAGCGGCGGCTGTTGGTTCGTTAA 2069919 Query 518211 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 518270 ||||||| | |||||| | |||| ||| |||||| |||||||| ||||||| ||| | Sbjct 2069918 TAATTCTAAGAACATTCAATCCAGTAATCGCTCCTGCGTCTTTAGTCGCTTGTCGTTGAG 2069859 Query 518271 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATATA 518328 | |||||||||||||| || ||||||||||| |||||||| || | | | || | ||| Sbjct 2069858 AGTCGTTAAAATATGCCGGTACAGTAATAACCGCATCAGTGACAGTACCT--CCGAGATA 2069801 Query 518329 AGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAA 518386 | || || |||||||||||||| |||| |||||| || ||||||| ||| || | | Sbjct 2069800 --CATTTCAGCTGTTTGTTTCATTTTGCTTAGAATCATGGAGGAAATTTCTTCAGGCGTA 2069743 Query 518387 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT---ATTACCAACATTA 518443 | | || ||| || | ||| || ||| || || |||| | || Sbjct 2069742 AACTTTTTACGTTCTTTCTTGTATTGGACCACAATTCCCGGCTTCCCATTATC-CGAT-- 2069686 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 | ||||| |||||||| | ||| || ||| ||||| | | |||||||| | ||| Sbjct 2069685 ACAACTTCGAATGGCCAATGTTTAATGTCTTGTTGAAGTTTAGGATCATTAAACTTTCTT 2069626 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562 || || | |||||| |||||||| |||||||| | ||||| || ||| ||| |||| Sbjct 2069625 CCGATCATTCGTTTCGCATCAAAGATAGTATTTTTCGGATTCATAGCAATCTGAAATTT 2069567 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 322239 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 322298 |||| || || || ||||| || || |||||||| ||||| ||| ||||||||| || | Sbjct 2069957 CTAAGCCATAAGCGAGAGCGGCGGCTGTTGGTTCGTTAATAATTCTAAGAACATTCAATC 2069898 Query 322299 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 322358 | | ||| | | || ||| ||||||| || | ||| ||||||||||| |||| Sbjct 2069897 CAGTAATCGCTCCTGCGTCTTTAGTCGCTTGTCGTTGAGAGTCGTTAAAATATGCCGGTA 2069838 Query 322359 CAGTAATAACTGC 322371 |||||||||| || Sbjct 2069837 CAGTAATAACCGC 2069825 >seq763 Length=6614576 Score = 201 bits (222), Expect = 9e-46 Identities = 801/1250 (64%), Gaps = 12/1250 (1%) Strand=Plus/Plus Query 517238 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 517297 ||||| || || || || |||||| ||| || || || || || || || | || || Sbjct 6224064 TTGTTGGTGGACTTCTCGACGGCAGACACGTTCAGGATGCCGTTAGCGTCGATGTCGAAG 6224123 Query 517298 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 517357 |||||||| || || || || || | | || || ||||| || || | || | Sbjct 6224124 GTGACTTCGATCTGCGGCACGCCGCGGGGCGCGGGCGGGATGCCGGTCAGCTCGAACTTG 6224183 Query 517358 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 517417 || ||| || || || || || | || || ||||| || | |||||| || Sbjct 6224184 CCGAGAAGGTTGTTGTCCTTGGTCATGGCGCGCTCGCCCTCAAACACTTGGATCAGCACA 6224243 Query 517418 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGT 517476 ||| ||| ||||| || || || || || ||||| ||| ||| || || || || Sbjct 6224244 CCAGGTTGGTTATCAGAGTAGGTGGTGAAGG-TCTGGGTTTGTTTGGTGGGGATGGTGGT 6224302 Query 517477 GTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGG 517536 ||| | | || | | ||||| | || || || || || | ||| || || || || Sbjct 6224303 GTTGCGCTTGATGAGCGTAGTCATGACGCCGCCGGCGGTCTCGATACCGAGCGAGAGGGG 6224362 Query 517537 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 517596 || || || | || | | | || | | || | | || || ||||| Sbjct 6224363 CGTCACGTCGAGCAGCAGCAGGTCCTGCACCTCCTCGGACTTGTCGCCGTGCAGGATAGC 6224422 Query 517597 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 517656 || || | || ||||| || || || || || || ||||| | | || || || | Sbjct 6224423 AGCCTGGACGGCCGCACCGTAGGCGACGGCCTCGTCGGGATTGATGGATTTGTTCAGCTC 6224482 Query 517657 TTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTC 517715 || || ||||| || | ||| || | ||| || || ||||| |||| ||||| | Sbjct 6224483 CTTGCCGTTGAAGAAGTCCTGAAGGAGCT-TCTGCACTTTGGGAATGCGAGTGGATCCAC 6224541 Query 517716 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 | || | ||| || || || | || || || |||| ||| | || || || | Sbjct 6224542 CGACCAGTACGATGTCGTGGATTTGGGACTTGTCCATTTTGGCGTCACGTAGGGACTTCT 6224601 Query 517776 CAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 517835 | ||||| || | | ||| |||| ||||| || || ||||| || | | Sbjct 6224602 CTACGGGCTCCATGGTAGATCTGAACAGGTCTGCGTTCAGCTCCTCGAAGCGGGCACGGG 6224661 Query 517836 TAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 517893 | || ||| | || || || || || ||||||| |||||| | |||||| | | || Sbjct 6224662 T--GATGGACGTGTAGAAGTCGATACCCTCGAACAGAGAATCGATTTCAATGCTGGCCTG 6224719 Query 517894 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 517953 ||| |||||||| || | | || || | || || || || | | || || | || Sbjct 6224720 AGTGGAAGAAGACAGGGTCCTCTTCGCCCTCTCGCAAGCCGTGCGCAACCTACGGAGCGC 6224779 Query 517954 TTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 518011 | | || ||| | || || |||| ||||| ||||| || || | ||| | Sbjct 6224780 TCT--CTTGTTGGTGGTAAGGTCCTTTTTGTATTTCCTCTTAAACTCCTGGACAAAGTGG 6224837 Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 | || | ||| || || || || ||||||||||| | ||| | || | |||| | | Sbjct 6224838 TTAACCATACGGTTGTCGAAGTCCTCACCTCCCAAGTGAGTGTCACCGGCGGTAGATTTC 6224897 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 || | ||| | ||||| || | || || | || |||||| || ||||| || | | Sbjct 6224898 ACCTCGAAGATGCCATCCTCGATAGTCAGGATAGACACATCAAAAGTACCACCGCCGAGA 6224957 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191 || |||||||||||||| |||| || || || |||||||| ||||||| ||| Sbjct 6224958 TCGAAAATAAGTACATTACGTTCTCCACCTCCCTTCTTGTCAAGACCGTACGCAATCGCA 6225017 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 |||||||| || || || || || | | |||||| || |||| || | || |||||| Sbjct 6225018 GCAGCAGTCGGCTCGTTGATGATCCGGAGAACATTGAGGCCAGAGATGGTACCCGCATCT 6225077 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 |||||||| ||||||||||| ||||| || || || ||||| || || || |||| Sbjct 6225078 TTAGTGGCCTGTCTTTGTGAGTCGTTGAAGTACGCTGGAACCGTGATTACTGCATTCTGC 6225137 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 || |||||| | || || || |||| ||||| || | | | |||||| Sbjct 6225138 ACCGTTTTACCGAGGTAGGCCTCGGCTGTTTCCTTCATCTTCGTAAGCACCATTGAGCTC 6225197 Query 518372 ATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTA 518431 | || ||| ||| | | |||| |||| || |||||||||| || | |||||| Sbjct 6225198 ACTTCTTCAGGGAAGAAGGTCTTGTCTTCACCTTTGTATGATACTTTAATCTTTGGTTTG 6225257 Query 518432 TTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAAC 518481 |||| || | | || | || ||||||| |||||| || | ||| || Sbjct 6225258 CCACCATCACTGACTACCTCGAAGGGCCAGTGTTTCATGTCGGCTTGTAC 6225307 >seq1872 Length=2557183 Score = 168 bits (186), Expect = 5e-36 Identities = 576/882 (65%), Gaps = 23/882 (3%) Strand=Plus/Plus Query 517462 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 |||||| |||| |||||||| ||| || || ||| ||| ||||| | ||||| |||| Sbjct 760102 ACAAGGGATTGGTGTGTTTCGATCTATGATTTTGTACATCATACCCCTAGCTGTCTCTAC 760161 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT- 517580 |||||| || | || ||||||||||||| | ||||| | ||| | | ||| Sbjct 760162 ACCAAGTGACAATGGCACCACATCAACTAGGAGCAAATTTTCTATTTTCTTGTGTCTTTC 760221 Query 517581 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 517640 | || | || | |||| ||||| || ||||||||| | || || ||||| || || || | Sbjct 760222 GCCCGATAATA-TAGCAGCTTGTATTGCAGCACCACAAGCTACTGCTTCTTCGGGGTTCA 760280 Query 517641 CAGTT--TCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAG 517697 | ||| | || ||| | | ||||| ||| | | ||| | || || || || ||| | Sbjct 760281 CTGTTGATGATATAGCTCT--ACCATCGAAGTATTCTTGCACTAACTT-TCGTATCTTTG 760337 Query 517698 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 517757 | || | | || || | | || ||| || | | | | ||| | || | | | Sbjct 760338 GTATTCTCGTACTACCCCCTATAAGTATAATATCGTTGATGTATTCTTTCTTCATTCTGG 760397 Query 517758 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTT 517817 ||| ||| ||| ||| | || | || |||||| |||||||| | || Sbjct 760398 CTTCCTCCAAAGCTTGTTCGATATATTTTATCGTATCTAAAAACAAATCTGAACATAATT 760457 Query 517818 CTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC-AATTCCTTCGAACAAAGAATCA 517876 |||||||| || || | | | | || || ||||| || | ||| || || Sbjct 760458 CTTCGAATAGGCACCTGGTTACTTTACCCGTGTAGTCTAATTCGTT-GTACAGCGACTCT 760516 Query 517877 ACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTC 517936 | || | || | || ||| | ||| | ||| |||||| || | ||| || Sbjct 760517 ATTTGTACTGTTGCTTCAGTTGCAGATGTTAGAATACGTTTTGCTCTCTCAGCGGCAACT 760576 Query 517937 CTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA--TATTTTCTCTTGA 517994 | |||| || || |||||| | || | | ||||| || | || | | || | Sbjct 760577 TTAAGTCGACGAAAAGCTTTTCC--ATCGCCTATAATCTCTTCTCCGTAACGTTTTTTAA 760634 Query 517995 AATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTAT 518054 |||||||| | | | | | |||||||| ||||||||||| || || | || | Sbjct 760635 AATCTTCAGCGAAGTAAGCCGCTAGACGATTGTCAAAATCTTCTCCACCGAGACGTGTGT 760694 Query 518055 TTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 | || | || | | | |||| | ||| |||| | | || |||| || |||| Sbjct 760695 TGCCAGCAGTCGATTTCACTTCGTAAACCGGTCCTTTAGATATAGTTAAAACAGAAACAT 760754 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT--TTTT 518169 | || ||||| || | |||| | || | |||||| ||||| |||| | |||| Sbjct 760755 CCAACGTGCCACCGCCTAAATCATATATCAATACATT--TTTCTCACTCTTAATATTTTT 760812 Query 518170 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 518229 ||| | |||||| || || ||||| || ||||| ||||||| |||||| ||||| |||| Sbjct 760813 ATCCAAACCATAAGCTAACGCAGCTGCGGTTGGCTCATTAACAATTCTTAAAACGTTAAA 760872 Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289 ||||||||| ||| ||| | |||| || |||||||| ||||||||||||| || || Sbjct 760873 ACCAGCAATCACTCCCGCAGCCCTAGTAGCCTGTCTTTGACAATCGTTAAAATACGCGGG 760932 Query 518290 AACAGTAATAACGGCATCAGTTAC--TTCTTTACCAATATAA 518329 ||| || ||||| ||||| ||| | |||| | |||| || Sbjct 760933 AACCGTTATAACTACATCATCTACCTTCCTTTTCAAATACAA 760974 >seq3427 Length=3459338 Score = 134 bits (148), Expect = 1e-25 Identities = 217/312 (70%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 |||||| ||||| | || |||||||| |||||||||||||| ||| ||||||| |||| | Sbjct 207631 TGTACCTTAATTCTCACTGAGGGAGACTCAGCTAAAACATTAGCTGTGTCTGGACTTAGT 207690 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | || |||||| |||| || ||||||||| | | || |||| |||||| || | Sbjct 207691 GTTGTAGGCAGAGATCATTACGGCGTTTTCCCATTAAAGGGTAAACCTTTGAACGTACGA 207750 Query 635561 GATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTT 635620 ||||| | |||| || || || |||| ||||||| | | |||||| | Sbjct 207751 GATGCATCACATAAACAAGTTTTAGAAAATGTTGAAATTAATAACCTTATAAAAATCCTC 207810 Query 635621 GGACT--TGAACAAGGAAAAGTTTA-------TGATGATCTCAAAGGTTTACGATATGGT 635671 ||| | | | || | || | || ||||||| | ||| ||| |||||||| Sbjct 207811 GGATTACAGTATAAAAAGAAATATAACTCACTTGATGATTTAAAAACATTAAGATATGGT 207870 Query 635672 AGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATG 635731 | | ||||| | |||||||| ||| || || | ||||||||||| | ||||| Sbjct 207871 AAAGTGATGATAATGGCTGATCAGGATCAAGACGGTTCGCATATCAAAGGTCTGATCATC 207930 Query 635732 AATTTTATCCAT 635743 || || || ||| Sbjct 207931 AACTTCATTCAT 207942 Score = 89.7 bits (98), Expect = 4e-12 Identities = 193/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 634322 TATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGATCATAAC 634381 ||| | || ||||| || ||||||||||||||| | | || || || || ||| |||| Sbjct 206497 TATTTTCCAGGTCTGTACAAAATTTATGATGAAATTTTGGTGAACGCTGCTGATAATAAG 206556 Query 634382 AAGAGATGT-CAAACATGTAATATTATCAAAGTTGATATCGATCAAAAAACAGGTCAAAT 634440 |||| | |||| ||| || |||| | | |||| || | ||| | | | ||| Sbjct 206557 CAGAGGGATCCAAAAATG-GATGTTATTAGAATTGACATTAACCAAGAGCAAAATACAAT 206615 Query 634441 TTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAACATAATATATG 634500 || |||| ||||||||| |||||| |||| || |||||||| | || || | Sbjct 206616 ATCAGTTTACAATAATGGTTGTGGTATCCCAGTAGTTATGCATAAAGACGAGAAAATGTT 206675 Query 634501 GGTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATAAAAACGAGGA 634560 || || | |||||||| || | ||||| || || |||||||| || ||||||| Sbjct 206676 TGTTCCGACTATGATTTTCGGTCATCTTTTGACATCATCTAATTAC---AATGACGAGGA 206732 Query 634561 --AAAAACTG-TTGGTGGTAAAAATGGTTTTGGCGCTAAGCTT 634600 | ||| || || |||| ||||| | ||| || |||||| Sbjct 206733 AGAGAAAGTGACAGGCGGTAGGAATGGCTATGGTGCAAAGCTT 206775 >seq303 Length=4096874 Score = 107 bits (118), Expect = 1e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| | || || |||| ||| || |||||||||||||| ||||||||| | || || || Sbjct 1924292 AAAGTAATAGTTGATTTTTCATCACCAAATATTGCTAAGGAAATGCATGTCGGTCACCTA 1924233 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 870913 || ||||| || || ||||| |||||| | | |||| | | || |||||| Sbjct 1924232 AGGTCAACCATCATAGGTGATAGCATTTGTCGAATTCTAGAGTTTTTAAACCATGATGTT 1924173 Query 870914 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 | || | |||||| | ||||| |||||||| ||||| || |||||||||||| || Sbjct 1924172 TTGCGATTGAATCATTTAGGTGACTGGGGAACACAATTTGGAATGTTAATTGCTCAT 1924116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780630159359044