Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq325 363 2e-95 seq336 320 2e-82 seq763 269 3e-67 seq2205 241 2e-58 seq2316 86.0 8e-12 seq3816 82.4 1e-10 >seq325 Length=5610163 Score = 363 bits (402), Expect = 2e-95 Identities = 665/956 (70%), Gaps = 31/956 (3%) Strand=Plus/Plus Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| |||| | || |||||||| || || |||| | | || ||||| || Sbjct 5118290 CGGAACAGGTCCGAATTGAGCTCCTCAAAGCGGGCGCGGGAGACGCGCGTGTAGAAGTCG 5118349 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTG--TTTGTGCCGTCGAAGATAACGTTC 7343 | || ||||| | || ||| ||||||||||| | | ||||| | || || | ||| | Sbjct 5118350 ATACCTTCGTAGAGCGCATCGATTTCAATGGTAGCCTCTGTGCTG--GAGGAGAGCGTCC 5118407 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT-ACCGGAAATA 7402 | || ||||||||| ||||| || | || || | || |||||||| | | || | Sbjct 5118408 GTTTGGCGCGCTCAGCAGCCGTGCGCAGGCGGCGCAACGCTCGCGGGTTTATACGCAA-A 5118466 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 |||||||||| || || |||||||| || | || ||| | ||||| ||||| Sbjct 5118467 TCTTTCTTATACTTGCGCTTAAACTCGTCCGCGAGGTGGTTCACCAGTCTGTTGTCGAAG 5118526 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA---CCTCCT 7519 || || || ||||| || || || || || |||||| | |||||||| | ||| | Sbjct 5118527 TCCTCTCCTCCCAAATGAGTGTCGCCGGCTGTCGCTCTCACTTCAAACAGGGAGCCTTCG 5118586 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT- 7578 || ||| | | | || |||||||| ||||| || || ||||| || || || ||||| Sbjct 5118587 TCGATGGTCAGGATGGACACATCAAAAGTACCCCCGCCGAGGTCGAATATCAGCACGTTG 5118646 Query 7579 CGTATCGTCGTCTTT---GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| ||| |||| |||||| || | ||||| || | || || || || || || Sbjct 5118647 CGT----TCGCCTTTCAGGTTCTTGTCCAAGCCGTAAGCCAACGCGGCGGCTGTGGGCTC 5118702 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||| || ||||| || || ||||||||| || || | |||| || || || || || | Sbjct 5118703 ATTGATGATACGCAATAC-GTTCAGGCCGGCGATGGCGCCCGCGTCCTTGGTGGCCTGCC 5118761 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | ||||| ||||||||||| ||||| || || | ||| || ||| || | || |||| Sbjct 5118762 GCTGCGAGTCGTTAAAGTATGCCGGCACTGTAATGACAGCCTCCCGCACCGTATTCCCGA 5118821 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG-AAATCTCTTCAGCC 7813 | || | || ||| | || |||||||| || || ||||| | || ||||| || | | Sbjct 5118822 GGTATGCCTCTGCGGTCTCCTTCATTTTCGTTAGCACCAT-GCTGCTGATCTCCTCCGGC 5118880 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 |||||| ||| | ||||| || | || |||||||| ||||||| ||||| | | Sbjct 5118881 GCAAACCTCTTCCTCTCACCTTTGTACTCCACTTCAATTTTGGGTTT-TCCGC--CCTCA 5118937 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 ||| || || ||| ||||| ||||| || | |||| || |||| ||||| Sbjct 5118938 CTGATCACTTTGAACGGCCAATGCTTCATGTCTTGCTGGATCTTGGGGTCGTCGAACTTG 5118997 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | ||| || || ||||| || || || |||||||| |||||||| | ||| |||||| Sbjct 5118998 CGTCCTATCAGCCGCTTGGCGTCGAACACTGTGTTGTTGGGGTTGAGGGCCACCTGGTTC 5119057 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 ||||| || || ||||| || || || | || || || || ||||||||||| || Sbjct 5119058 TTCGCTGCATCGCCGATCAGCCGCTC---TGTGTCGGTGAATGCTACGTACGATGGTGTG 5119114 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || | || ||||||||||| || || || || || | | | ||||| || || || Sbjct 5119115 GTCCTGTTACCTTGGTCGTTGGCGATGATCTCCACATTGCCATGCTGCCACACTCCCACA 5119174 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATTTT 8169 || |||||||| ||||| | ||| || || |||||| | |||||| | |||||| Sbjct 5119175 CATGAATACGTCGTTCCCAGATCTATTCCAATTGCT---GGCATTTTGT-TATTTT 5119226 Score = 298 bits (330), Expect = 7e-76 Identities = 652/958 (68%), Gaps = 30/958 (3%) Strand=Plus/Minus Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||||| |||| | || ||||| || || ||||||| | ||||||||| || Sbjct 5141067 ACGGAACAGGTCCGAATTAAGCTCCTCGAAGCGGGCACGGGACACACGTGTATAGAAGTC 5141008 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTT 7342 | ||| ||||| | || || ||||| ||||| | | |||| | || || | ||| Sbjct 5141007 GATGCCTTCGTAGAGCGCGTCGATTTCGATGGTAGCCTCGGTGC--TAGAGGAGAGCGTC 5140950 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT-ACCGGAAAT 7401 || || ||||||||| ||||| || | || || | || |||||||| | | || Sbjct 5140949 CGTTTAGCGCGCTCAGCAGCCGTACGCAGGCGGCGCAAAGCTCGCGGGTTTATTCGTAA- 5140891 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 ||| ||||| | ||||| || |||||||| | || ||| | ||||| || || Sbjct 5140890 ATCCTTCTTGTACTTACGCTTGAACTCTTCGGCGAGGTGATTCACCAGTCTGTTGTCAAA 5140831 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTC 7517 || || || |||| ||| || || || || |||||||| |||||||| || |||| Sbjct 5140830 GTCCTCGCCTCCCAGGTGAGTGTCGCCGGCTGTCGCTTTAACTTCAAACAGGGAGCCCTC 5140771 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | | || | | | || || || || |||||||| || || || || || || |||| Sbjct 5140770 GT-CGATAGTGAGAATGGACACGTCGAAAGTACCACCGCCGAGATCGAATATCAGCACGT 5140712 Query 7578 TCGTATCG-TCGTCTTT---GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | || ||| |||| |||||| || | ||||| || | || || || || || Sbjct 5140711 TG----CGCTCGCCTTTCAGGTTCTTGTCCAAGCCGTAAGCCAACGCGGCGGCTGTGGGC 5140656 Query 7634 TCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || || ||||| || || ||||| ||| || || | |||| || || || || || Sbjct 5140655 TCGTTGATGATACGCAATAC-GTTCAAGCCGGCGATGGCGCCCGCGTCCTTGGTGGCCTG 5140597 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || ||||| ||||| ||||| ||||| || || | ||| || ||| || | || Sbjct 5140596 CCGCTGCGAGTCGTTGAAGTACGCCGGCACTGTGATGACAGCCTCCCGCACCGAACTGCC 5140537 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA-ATCTCTTCAG 7811 ||| || | || ||| | || ||||| || || || ||||| | || ||||| || | Sbjct 5140536 GAGGTATGCCTCTGCGGTCTCCTTCATCTTCGTCAGCACCAT-GCTGCTGATCTCCTCCG 5140478 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 || ||| ||| | || || || || || || ||||| ||||||| ||||| | Sbjct 5140477 GTGCGAACCTCTTCCTCTCGCCCTTGAACTCCACCTCAATTTTGGGTTT-TCCGC--CCT 5140421 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | ||| || ||| ||| ||||| |||||| || | |||| || |||| |||| Sbjct 5140420 CACTGATCACTTTAAACGGCCAATGTTTCATGTCTTGCTGGATCTTGGGGTCGTCGAACT 5140361 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | ||| || || ||||| || || || ||||| || |||||||| | ||| |||| Sbjct 5140360 TGCGTCCTATCAGCCGCTTGGCGTCGAACACTGTATTGTTGGGGTTGAGGGCCACCTGGT 5140301 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 ||||||| || || ||||| || || || | || || || || ||||||||||| | Sbjct 5140300 TCTTCGCTGCATCGCCGATCAGCCGCTC---TGTGTCGGTGAATGCTACGTACGATGGTG 5140244 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || | || ||||||||||| || || || || || | | | ||||| || || | Sbjct 5140243 TGGTCCTGTTGCCTTGGTCGTTGGCGATGATCTCCACATTGCCATGCTGCCACACTCCCA 5140184 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATTTT 8169 | || |||||||| ||||| | ||| || || |||||| | | | |||| |||||| Sbjct 5140183 CACATGAATACGTCGTTCCCAGATCTATTCCAATTGCTGGCATTTTGTTAT-TATTTT 5140127 Score = 257 bits (284), Expect = 2e-63 Identities = 626/934 (67%), Gaps = 21/934 (2%) Strand=Plus/Plus Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||||| |||| | || ||||| || || ||||||| | |||||||| || Sbjct 5126879 ACGGAACAGGTCCGAATTGAGCTCCTCGAAGCGGGCACGGGACACACGAGTATAGAAGTC 5126938 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTT 7342 | ||| || || | | || || || |||| | | |||| | || || | ||| Sbjct 5126939 GATGCCTTCATAGAGGGCGTCGATCTCGATGGAGGCCTCGGTGCTG--GAGGAGAGCGTG 5126996 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT-ACCGGAAAT 7401 || || |||||||| ||||| || | || || | ||||||||||| | | || Sbjct 5126997 CGTTTGGCGCGCTCGGCGGCCGTACGCAGGCGGCGCAAAGCACGCGGGTTCATACGCAA- 5127055 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 ||| ||||| | || || ||||||| || | || ||| | ||||| ||||| Sbjct 5127056 ATCCTTCTTGTACTTGCGCGTAAACTCGTCCGCGAGGTGGTTCACCAGTCTGTTGTCGAA 5127115 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTC 7517 || || || || | || || || || || |||||||| ||||| || ||| |||| Sbjct 5127116 GTCCTCGCCTCCAAGATGCGTGTCGCCGGCCGTCGCTTTCACTTCGAATAGGGATCCCTC 5127175 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | | || | | | || || || || || || || || || || || || || |||| Sbjct 5127176 GT-CGATAGTGAGAATGGACACGTCGAAAGTTCCTCCGCCGAGATCGAATATCAGCACGT 5127234 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | ||| | | | ||||| || | ||||| || | || || || || || |||| Sbjct 5127235 TACGCTCGCCTTTTAGATTCTTGTCCAAGCCGTAAGCCAACGCGGCGGCTGTGGGCTCAT 5127294 Query 7638 TAATAATACGAAGACA-GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 | || ||||| | ||| ||||||||| || || | |||| || || || || || || Sbjct 5127295 TGATGATACGCA-ACACGTTCAGGCCGGCGATGGCGCCCGCGTCCTTGGTGGCCTGCCGC 5127353 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| ||||| ||||| || || | ||| || ||| || ||||| Sbjct 5127354 TGCGAGTCGTTGAAGTACGCCGGCACTGTGATGACAGCCTCCCGCACAGCTCCGCCGAGG 5127413 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAA-ATCTCTTCAGCCGC 7815 || | || ||| | || ||||| || || || ||||| | || ||||| || | ||| Sbjct 5127414 TATGCCTCTGCGGTCTCCTTCATCTTCGTCAGCACCAT-GCTGCTGATCTCCTCCGGCGC 5127472 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||| || | || || ||||| || || ||||| ||||||| ||||| || | Sbjct 5127473 GAACCTCTTTTTCTCGCCCTTAAACTCCACCTCAATTTTGGGTTT-TCCGC--CATCACT 5127529 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| || || ||| ||||| ||||| || | |||| || | || ||||| | Sbjct 5127530 GATCACTTTGAACGGCCAATGCTTCATGTCTTGCTGGATCTTGGGATCGTCGAACTTGCG 5127589 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| || || ||||| || || || |||||||| |||||||| | ||| |||||||| Sbjct 5127590 TCCTATCAGCCGCTTGGCGTCGAACACTGTGTTGTTGGGGTTGAGGGCCACCTGGTTCTT 5127649 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||| || || ||||| || || || | | | || || || ||||||||||| || || Sbjct 5127650 CGCTGCATCGCCGATCAGCCGCTCTGTGT---CGGTGAATGCTACGTACGATGGTGTGGT 5127706 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 | || ||||||||||| || || || || || | | | ||||| || || || || Sbjct 5127707 CCTGTTACCTTGGTCGTTGGCGATGATCTCCACATTGCCATGCTGCCACACTCCCACACA 5127766 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 |||||||| ||||| | ||| || || |||||| Sbjct 5127767 TGAATACGTCGTTCCCAGATCTATTCCAATTGCT 5127800 >seq336 Length=3672263 Score = 320 bits (354), Expect = 2e-82 Identities = 1052/1614 (65%), Gaps = 36/1614 (2%) Strand=Plus/Plus Query 6571 ATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAA 6630 ||| ||||| || ||| | || ||||||| | ||| | ||| || ||| || | Sbjct 247223 ATCGTCATCCTTGTACATCTCAGCATCTTCTAGCATACGCTGAATCTCAGCTTGGGAGAG 247282 Query 6631 TCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGC 6690 ||| || || |||||| | || || |||| || || | | || |||| ||| Sbjct 247283 TCTGCCTTTGTCATTCTTTATAACTATATTTTTACTCTTGCCAGTGCTGTTCTCTTTAGC 247342 Query 6691 ACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACC 6750 || || | |||||||| || || | || || |||||| ||||| ||| ||| Sbjct 247343 GGAAACGTTGAGGATACCATTAGCGTCGATGTCAAATGTTACATCTATTTGAGGTACACC 247402 Query 6751 CCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGC 6810 | ||||| | ||| ||||| |||| |||||| || || | | | | |||| | | | Sbjct 247403 GCGAGGTGCAGGTGGTATACCAGTTAGATCAAAAGTTCCTAACAGATTATTATTCTTGGT 247462 Query 6811 CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGT 6870 | | | |||||||||||| |||| ||| | || || ||||||||||| || Sbjct 247463 CATTGCCCTTTCACCTTCATACACTTGAATGTTGACAGCTGGTTGATTATCCGAATAGGT 247522 Query 6871 TGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTC-TCGGAATAACCGGGGTCA 6929 | || | || | | | || || | | || | | || || | | ||| Sbjct 247523 GGTAAAAGTCTGGGAGTGTGTGCAAGGGATTTTAGCGTTGCGTTCGACTATCTTCG-TCA 247581 Query 6930 TAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGT 6989 ||| |||||| ||||| | || ||||| | || || || || | | | || | Sbjct 247582 TAACACCACCAGCTGTTTCAATACCTAGAGATAAGGGGGTGACATCGACTAAAAGCACAT 247641 Query 6990 CTTGAACAGATTCG--TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047 | |||| || | | | || || |||| || || || || || | || || || Sbjct 247642 CCTGAATC--TTGGAATGACGCTCCCCGCTTAATATTGCAGCCTGAACTGCAGCACCATA 247699 Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107 || || |||||||| || ||||| | | ||| |||| |||||| ||||| ||| Sbjct 247700 AGCCACAGCCTCATCAGGATTAATAGATAAATTGAGTTTTTTACCATTAAAGAAATTTTG 247759 Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167 ||| | | ||||| || || || || || || || || |||| ||| || ||||| | Sbjct 247760 TAATAAATTCTGAATCTTAGGTATACGAGTTGAGCCCCCAACCAGAACAATATCATTGA- 247818 Query 7168 TTTCGA---TTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 | || ||| || || || | || | | ||| || || || || | | | Sbjct 247819 --TAGAGCTTTTGTCCATTTTGGCATCATTTAAAGCTTTCTCTACTGGCTCTAGAGTGAT 247876 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 ||| || || || |||||||| || ||||| | | ||| || | |||| || Sbjct 247877 ACGAAATAAATCTGCGTTTAGTTCCTCGAATCGTGCTCTTGAAATTCGTGAAAAGAAGTC 247936 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344 | || ||||| | | ||| ||||| || ||| || | | ||||| | ||||| Sbjct 247937 TATACCCTCGTAAAGAGCATCGATTTCTATATTTGCTTCAGTACTGGAAGAAAGTGTTCG 247996 Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 || || || || || || || || |||||||| || | ||||| ||||| Sbjct 247997 TTTAGCTCGTTCGGCAGCAGTGCGCAAGCGACGAAGTGCTCTTGGGTTCGATTTGATATC 248056 Query 7405 TTTCTTATGTTTACGTTTAAACTCTTCAG--AGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 ||| |||| || | ||||||||| |||| |||| | || | ||| || ||| Sbjct 248057 TTTTTTATACTTTCTTTTAAACTCGTCAGCAAGAAAGTT--AACTAATCTATTGTCAAAA 248114 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA---CCTCCT 7519 ||||||||||| | || || || || || || ||||| |||||||| | | ||| | Sbjct 248115 TCTTCACCACCAAGATGAGTGTCTCCGGCTGTAGCTTTTACTTCAAAAAGAGAACCTTCA 248174 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT- 7578 ||||| | | | || |||||||| ||||| || || | ||||| || | || || Sbjct 248175 TCAATCGTAAGGATGGATACATCAAAAGTACCGCCTCCTAAATCAAAGATTAAGACTTTG 248234 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 ||| || | | | |||||||| || ||||| || | ||| || |||||||| ||||| Sbjct 248235 CGT-TCTCCTTTTAAATTCTTATCAAGGCCGTAAGCCAAAGCTGCAGCCGTTGGCTCATT 248293 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 ||| || | ||| ||| | || ||||||| |||||||||| || ||||||| || Sbjct 248294 AATTATTCTGAGAACGTTTAATCCGGCAATAGCACCCGCATCTTTAGTAGCTTGTCTCTG 248353 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 || || || ||||| || || || || | || || | || ||||| || || ||||| Sbjct 248354 AGAGTCATTGAAGTAAGCAGGTACTGTAATAACTGCTTTAGTTACTTTGTTGCCTAGATA 248413 Query 7759 CGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATG-AAATCTCTTCAGCCGCA 7816 ||||| || | ||||||| |||| |||| ||||| | || | || || | | Sbjct 248414 TGATTCAGCTGTCTCTTTCATTTTTAGTAA-CACCAT-GCTGCTTACTTCCTCTGGAGTG 248471 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||| ||| | || || ||||| |||| ||| | ||||| | | | || | Sbjct 248472 AACACTTTTGCTTTTCCTTTAAACGATACTTGAATTTTAGGTTT---CCCGTTATCGTTG 248528 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TCCGAAAACTTTCT 7935 | ||| ||| | | ||||| || || || | || | | || || || | |||| | Sbjct 248529 ACAACTTTAAAGGGCCAATGCTTTATGTCTTGCTGTA-CAGTAGGATCATCATACTTACG 248587 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| || | |||||| ||||| |||| || || | |||||||||||| || || || Sbjct 248588 TCCAATCAAACGCTTGGCATCGAAAATAGTATTATCAGGGTTCATGGCTACCTGATTTTT 248647 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || || || || ||||| | || || ||||| || || || || || || Sbjct 248648 GGCTGCATCTCCTATGAGCCGTTC---GGTGTCAGTGAACGCAACATAAGACGGAGTTGT 248704 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || ||||| ||||| ||||| || |||||| | | |||||| |||| || || Sbjct 248705 GCGGTTTCCTTGATCGTTTGCAATTATGTCTACGTTACCATGTTGCCACGCGCCCACACA 248764 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTATATATTTT 8169 ||||| |||||||| ||||||||||| | || ||||||||| |||||||| Sbjct 248765 GGAATATGTTGTTCCCAAATCAATACCCACAGC---AGTCATTTTTTATATTTT 248815 >seq763 Length=6614576 Score = 269 bits (298), Expect = 3e-67 Identities = 677/1019 (66%), Gaps = 15/1019 (1%) Strand=Plus/Plus Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCG 7003 || |||| || || || || || |||||||| | || | |||||| || || ||| Sbjct 6224340 GTCTCGATACCGAGCGAGAGGGGCGTCACGTCGAGCAGCAGCAGGTCCTGCACCTCCTCG 6224399 Query 7004 TTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | || || | ||| || || ||||| | ||| ||||| ||||| ||||| ||| Sbjct 6224400 GACTTGTCGCCGTGCAGGATAGCAGCCTGGACGGCCGCACCGTAGGCGACGGCCTCGTCG 6224459 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 || || || | ||| ||||| || || ||||| || | ||| | | | || | | Sbjct 6224460 GGATTGATGGATTTGTTCAGCTCCTTGCCGTTGAAGAAGTCCTGAAGGAGCTTCTGCACT 6224519 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || || || || || ||||||||||||| ||||| || | | || || || || || Sbjct 6224520 TTGGGAATGCGAGTGGATCCACCGACCAGTACGATGTCGTGGATTTGGGACTTGTCCATT 6224579 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT---ACATTTACGGAACAAGTCCATA 7240 || | ||| || || | || || || || ||||| | || | ||||| ||| Sbjct 6224580 TTGGCGTCACGTAGGGACTTCTCTACGGGCTCCATGGTAGATCT---GAACAGGTCTGCG 6224636 Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| || || |||||||| ||||| || ||||| || | || ||| | | Sbjct 6224637 TTCAGCTCCTCGAAGCGGGCACGGGTGATGGACGTGTAGAAGTCGATACCCTCGAACAGA 6224696 Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||||| ||||||||| | | || | | ||||| | || | ||| || | ||| || Sbjct 6224697 GAATCGATTTCAATGCTGGCCTGAGTGGAAGAAGACAGGGTCCTCTTCGCCCTCTCGCAA 6224756 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 ||||| || || | ||| || || | | ||| || || || || || | ||| | Sbjct 6224757 GCCGTGCGCAACCTACGGAGCGCTCTCTTGTTGGTGGTAAGGTCCTTTTTGTATTTCCTC 6224816 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 |||||||| | ||||| || | | ||||| || ||||| |||||||| Sbjct 6224817 TTAAACTCCTGGACAAAGTGGTTAACCATACGGTTGTCGAAGTCCTCACCTCCCAAGTGA 6224876 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| | ||| || || ||||| || | || || | | | || ||| Sbjct 6224877 GTGTCACCGGCGGTAGATTTCACCTCGAAGATGCCATCCTCGATAGTCAGGATAGACACA 6224936 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTT 7599 ||||| |||||||| || || || ||||| ||||| || ||| || | || ||||| Sbjct 6224937 TCAAAAGTACCACCGCCGAGATCGAAAATAAGTACATTACGT-TCTCCACCTCCCTTCTT 6224995 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || ||||||||||| || || || || || || || || || || || ||| || || Sbjct 6224996 GTCAAGACCGTACGCAATCGCAGCAGCAGTCGGCTCGTTGATGATCCGGAGAACATTGAG 6225055 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||| || || |||||||||| || || |||| ||| || ||||| ||||| || || Sbjct 6225056 GCCAGAGATGGTACCCGCATCTTTAGTGGCCTGTCTTTGTGAGTCGTTGAAGTACGCTGG 6225115 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||||| | || || | | || | |||||||| || | || || | || ||||| Sbjct 6225116 AACCGTGATTACTGCATTCTGCACCGTTTTACCGAGGTAGGCCTCGGCTGTTTCCTTCAT 6225175 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT-TTCACCGTTAA 7838 || ||||| ||||| || | ||||||| | | | || | || |||||| || Sbjct 6225176 CTTCGTAAGCACCATTGAGCTCACTTCTTCAG-GGAAGAAGGTCTTGTCTTCACCTTTGT 6225234 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | |||| |||| | ||||| | || ||| || |||| | | ||| | || Sbjct 6225235 ATGATACTTTAATCTTTGGTTTGCCACCATCAC---TGACTACCTCGAAGGGCCAGTGTT 6225291 Query 7899 TCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATC 7956 |||| ||| |||| | |||| | |||| ||||| | ||||| || || || || || Sbjct 6225292 TCATGTCGGCTTGTA-CTGTGGTGTCCTCGAACTTGCGACCGATGAGTCGTTTGGCGTC 6225349 Score = 96.9 bits (106), Expect = 4e-15 Identities = 129/179 (72%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| ||||||||||| || |||||||| || || || || |||||||| || | Sbjct 6225914 GTGTTGTTGGGGTTCATCGCCACCTGGTTCTTGGCGGCATCGCCAATAAGACGCTCCGTG 6225973 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | |||| || ||||| || || || || || | || || |||||||| || || || Sbjct 6225974 T---CCGTGAAGGCGACATATGAGGGCGTGGTCCTGTTGCCCTGGTCGTTGGCGATGATC 6226030 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || ||| || | || || |||||||| |||||||| || ||||||||||| Sbjct 6226031 TCCACCTTCCCGTGCTGGAATACACCCACGCACGAGTACGTTGTACCCAAATCAATACC 6226089 >seq2205 Length=3731788 Score = 241 bits (266), Expect = 2e-58 Identities = 491/721 (68%), Gaps = 14/721 (2%) Strand=Plus/Minus Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTT-TCGATT 7175 ||| |||||||| | || || ||||| || ||||| | || || | | || ||| | Sbjct 2070445 TTGTATTTTCGGTACTCTAGTAGATCCCCCAACCAATATGACATCGTCTATTTCTCG-TG 2070387 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT-ACGGAACAAG 7234 ||| ||||||| ||| | || ||||| || || ||| || ||| ||| || || Sbjct 2070386 TATTCATCTTTGCATCTTTCAATGCATTTTCAACTGGAACCA-ACGTTTGACGAAATAAA 2070328 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAA---TGGATGTATAGAAATCAACGCCG 7291 ||| ||||| ||||||||| || || | || | |||| ||||||||| | || Sbjct 2070327 TCCGAACACAATTCCTCAAATCGAGCTCTAGTTAGCTTGGA---ATAGAAATCTATTCCT 2070271 Query 7292 TCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCG 7351 || | | | || ||||| || | | || || ||||||| | ||||| || || Sbjct 2070270 TCATGCAGGGCGTCTATTTCTATACTAGCTTCTGTATTCGAAGAAAGTGTTCGTTTAGCT 2070211 Query 7352 CGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTA 7411 | || || || |||| | | | ||| || ||| || || | ||||| ||||||| Sbjct 2070210 CTTTCGCATGCAGTTCTCAGTCTTCTAAGAGCTTTCGGATTGCCAGTAATATTTTTCTTA 2070151 Query 7412 TGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCA 7471 ||| |||| ||| |||| | ||| || | | || || ||||| || || Sbjct 2070150 AATTTCCGTTCAAATTCTTGACTGAAATGATCTACCATTCGGCTGTCAAAATCCTCGCCT 2070091 Query 7472 CCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC---AATGTTT 7528 || | ||| || || || || || | ||| ||||| || | |||||| ||| | Sbjct 2070090 CCAAGGTGAGTGTCACCTGCTGTTGATTTTACTTCGAACAATGATCCTTCTGAAATCTGA 2070031 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588 | | |||||| || || |||||||| || |||||||| || ||||| ||| | || | Sbjct 2070030 AGTATCGAAACGTCGAAAGTACCACCGCCAAGGTCAAATATTAGTACATTCTTCTCACCT 2069971 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 | | | || || | || || |||| ||| || || |||||||| |||||||| | | Sbjct 2069970 TTTAAATCTTTGTCTAAGCCATAAGCGAGAGCGGCGGCTGTTGGTTCGTTAATAATTCTA 2069911 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 ||| |||| |||| ||| | | | || ||||| |||||||||||||| || |||||| Sbjct 2069910 AGAACATTCAATCCAGTAATCGCTCCTGCGTCTTTAGTCGCTTGTCGTTGAGAGTCGTTA 2069851 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 || || ||||| || || | ||||| || ||||| | ||||||||| ||| || Sbjct 2069850 AAATATGCCGGTACAGTAATAACCGCATCAGTGACAGTACCTCCGAGATACATTTCAGCT 2069791 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTT-CGT 7827 | | |||||||||| | |||| ||| || ||||| ||||||| || ||||| ||| ||| Sbjct 2069790 GTTTGTTTCATTTTGCTTAGAATCATGGAGGAAATTTCTTCAGGCGTAAACTTTTTACGT 2069731 Query 7828 T 7828 | Sbjct 2069730 T 2069730 >seq2316 Length=6356476 Score = 86.0 bits (94), Expect = 8e-12 Identities = 172/248 (69%), Gaps = 13/248 (5%) Strand=Plus/Plus Query 104353 GCTTTACTTCGAAGGTAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGC 104412 |||||| | || | |||||||| || ||||| ||||| ||||||| ||||| | ||| Sbjct 2965231 GCTTTA-TACGTAAATAATACATTCCTGTTTTCAAACCCATTTTCCATGCGTAAAAGTGA 2965289 Query 104413 ATAGACGAAAGTTTTGAAATTGTTGGACTCT-CGAC--GAATAAGTTCATACTTTGACTT 104469 || || | | |||| | | || | || | || |||| ||| | | ||||||| Sbjct 2965290 ATTGATGTCAATTTTCCA-TAATTCGGTTCAGCCACATGAAT--GTTAAAAGATTGACTT 2965346 Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||||||| | |||||| ||| || ||||| | || | ||||| | || ||| Sbjct 2965347 TGGTCTATAAATGCACCTCGATCAGCAGCCATTTTAATTGTAGTTTTAACAGAAATCTCC 2965406 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATA---TCAATAATGTTTTGAACA 104586 || || |||||||||||||| ||| || | |||||| || ||| ||||||| Sbjct 2965407 CAAACTGTTTTATACAATTCTCTAATGTCCTTTGGTATACGCTCGATA---TTTTGAATG 2965463 Query 104587 GACCCATT 104594 || ||||| Sbjct 2965464 GAACCATT 2965471 >seq3816 Length=2159541 Score = 82.4 bits (90), Expect = 1e-10 Identities = 166/244 (68%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 11439 ACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTC 11498 || ||| || |||| | |||||||||||||| ||||||| ||| || ||| || || Sbjct 1151589 ACCTCTCTTTCTACCGACTGCATCAATTTCATCAATAAAGAGAATGCAAGGTGCATGTTT 1151648 Query 11499 ACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAAC 11558 ||||||| ||| |||||||||||||| | ||||| || ||||||||||| | Sbjct 1151649 TCGTGCCATAGAAAACATATCACGGACTCTAGAAGGACCTACACCGACAAACATTTCCAG 1151708 Query 11559 GAACGATGACCCCGAACACTG-AATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 || || || | |||| | || || ||||| || ||| || ||| | || | Sbjct 1151709 AAATTCAGAACCAG-ACACCGTTATGAAGGGAACATTAGCTTCTCCAGCTGTTGCTTTAG 1151767 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | || || || ||||| ||| ||| || | | ||||| | || ||||||| Sbjct 1151768 CAAGTAAGGTCTTTCCAGTACCAGGTGGACCAGTAAGCAGCGCACCTTTAGGAATTTTAG 1151827 Query 11678 CACC 11681 | || Sbjct 1151828 CTCC 1151831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635102043694160