Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq336 251 5e-61 seq2205 163 2e-34 seq1095 145 5e-29 seq2316 131 1e-24 seq325 127 1e-23 seq763 123 2e-22 seq3427 113 3e-19 seq303 102 5e-16 seq1964 91.5 1e-12 seq593 91.5 1e-12 >seq336 Length=3672263 Score = 251 bits (278), Expect = 5e-61 Identities = 406/584 (70%), Gaps = 0/584 (0%) Strand=Plus/Minus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||||||||| ||||| || || ||||| | | |||||| ||||||| ||||| Sbjct 248791 GGTATTGATTTGGGAACAACATATTCCTGTGTGGGCGCGTGGCAACATGGTAACGTAGAC 248732 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 |||||||| || || ||||| || | ||||| || || |||||| | || ||||| || Sbjct 248731 ATAATTGCAAACGATCAAGGAAACCGCACAACTCCGTCTTATGTTGCGTTCACTGACACC 248672 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 |||| || || |||||||| || ||| |||| | || || |||| |||||||||| Sbjct 248671 GAACGGCTCATAGGAGATGCAGCCAAAAATCAGGTAGCCATGAACCCTGATAATACTATT 248612 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || ||||| || | |||||||| ||||| | ||||||| | ||||| || || || Sbjct 248611 TTCGATGCCAAGCGTTTGATTGGACGTAAGTATGATGATCCTACTGTACAGCAAGACATA 248552 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACAC 474634 |||||||| ||||| || | || | | || ||||| | || ||| | Sbjct 248551 AAGCATTGGCCCTTTAAAGTTGTCAACGATAACGGGAAACCTAAAATTCAAGTATCGTTT 248492 Query 474635 GCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 ||| || | ||| || | || || || | ||||| ||| |||||| Sbjct 248491 AAAGGAAAAGCAAAAGTGTTCACTCCAGAGGAAGTAAGCAGCATGGTGTTACTAAAAATG 248432 Query 474695 AAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCA 474754 ||| | || || |||||||| || | |||||||| | ||||| ||||| || || Sbjct 248431 AAAGAGACAGCTGAATCATATCTAGGCAACAAAGTAACTAAAGCAGTTATTACAGTACCT 248372 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 || || || ||||| ||||| | ||||| |||||||||||||| ||||| || | Sbjct 248371 GCTTACTTCAATGACTCTCAGAGACAAGCTACTAAAGATGCGGGTGCTATTGCCGGATTA 248312 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 || ||| | | || |||||||| ||||| || || || | ||||| || ||||||||| Sbjct 248311 AACGTTCTCAGAATAATTAATGAGCCAACGGCTGCAGCTTTGGCTTACGGCCTTGATAAG 248252 Query 474875 AATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 |||| | |||| || || ||||||||||||| ||||| Sbjct 248251 AATTTAAAAGGAGAACGCAAAGTCTTAATCTTTGATTTAGGAGG 248208 Score = 210 bits (232), Expect = 1e-48 Identities = 582/878 (66%), Gaps = 22/878 (3%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 |||| | |||||| |||| ||| ||||| ||||| | |||||||||||||||||| Sbjct 248173 GAAGGTTCTCTTTTTGAAGTAAAAGCTACAGCCGGAGACACTCATCTTGGTGGTGAAGAT 248114 Query 475400 TTTGATAATAGACTTGT-ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGA 475458 ||||| |||||| | || | | | | || ||| || || || || || ||||| || Sbjct 248113 TTTGACAATAGATTAGTTAACTTTCT-TGCTGACGAGTTTAAAAGAAAGTATAAAAAAGA 248055 Query 475459 TCTTTCAACATCTG---CTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 | | ||| ||| | | |||| | | || | | |||||| ||||| ||||| Sbjct 248054 TAT--CAA-ATCGAACCCAAGAGCACTTCGTCGCTTGCGCACTGCTGCCGAACGAGCTAA 247998 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 ||| | |||||||| |||| || | | | | ||| | ||| |||||| || || || Sbjct 247997 ACGAACACTTTCTTCCAGTACTGAAGCAAATATAGAAATCGATGCTCTTTACGAGGGTAT 247938 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 || | | | | ||| |||| || ||| || || | | ||| | ||| | Sbjct 247937 AGACTTCTTTTCACGAATTTCAAGAGCACGATTCGAGGAACTAAACGCAGATTTATTTCG 247878 Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAAT-CACAAG 475694 | || | || || || || ||| | | | ||| | ||| | |||||| | | | Sbjct 247877 TATCACTCTAGAGCCAGTAGAGAAAGCTTTAAATGATGCCAAAATGGACAAAAGCTCTA- 247819 Query 475695 TCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTT 475754 || |||| |||||||| || || || ||||| | || || || || |||| | || Sbjct 247818 TCAATGATATTGTTCTGGTTGGGGGCTCAACTCGTATACCTAAGATTC-AGAATTTATTA 247760 Query 475755 CATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCA 475813 || || | |||||||||||||| | ||| | | | ||||||||||| ||||| || Sbjct 247759 CAAAATTTCTTTAATGGTAAAAAACTCAATTTATCTATTAATCCTGATGAGGCTGTGGCT 247700 Query 475814 TATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA--TCAGACGAGAAACTAAATA 475871 ||||| ||||| || || || || || ||| || | ||| | | | | | | | Sbjct 247699 TATGGTGCTGCAGTTCAGGCTGCAATATTAAGCGGGGAGCGTCATTCCA-AGATTCAGGA 247641 Query 475872 ATATTGTACTT---GTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGA 475928 ||| ||| || || || || || | || ||||| ||||||||| ||| || Sbjct 247640 ----TGTGCTTTTAGTCGATGTCACCCCCTTATCTCTAGGTATTGAAACAGCTGGTGGTG 247585 Query 475929 TTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTT 475988 ||||||| || | | || | || || ||||| |||| | | || | ||| Sbjct 247584 TTATGACGAAGATAGTCGAACGCAACGCTAAAATCCCTTGCACACACTCCCAGACTTTTA 247525 Query 475989 CCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAAT 476048 |||| ||||| ||||||||| || |||| | ||| ||| | | |||||||||||| | Sbjct 247524 CCACCTATTCGGATAATCAACCAGCTGTCAACATTCAAGTGTATGAAGGTGAAAGGGCAA 247465 Query 476049 TCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCA 476108 | || || ||||||| | ||||||||| |||| ||||| || ||||| || Sbjct 247464 TGACCAAGAATAATAATCTGTTAGGAACTTTTGATCTAACTGGTATACCACCTGCACCTC 247405 Query 476109 GAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTA 476168 | || || |||||||| || || || ||||| || || || |||||||| || || ||| Sbjct 247404 GCGGTGTACCTCAAATAGATGTAACATTTGACATCGACGCTAATGGTATCCTCAACGTTT 247345 Query 476169 CTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATA 476206 | ||| || || | | |||||||||||||||| Sbjct 247344 CCGCTAAAGAGAACAGCACTGGCAAGAGTAAAAATATA 247307 >seq2205 Length=3731788 Score = 163 bits (180), Expect = 2e-34 Identities = 256/362 (71%), Gaps = 6/362 (2%) Strand=Plus/Plus Query 474506 AATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAA 474565 |||||||| |||||||| ||| || |||| || | || ||| ||||| | | | ||| Sbjct 2069594 AATACTATCTTTGATGCGAAACGAATGATCGGAAGAAAGTTTAATGATCCTAAACTTCAA 2069653 Query 474566 TCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA 474625 || || |||||||| || | || || | | ||| || || || | Sbjct 2069654 CAAGACATTAAACATTGGCCATTCGAAGTTGTATCGGATAATGGGAAGCCGGGAATTGTG 2069713 Query 474626 G--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 | ||||||| | | | || |||| | ||| | || ||| ||||||| || ||| || Sbjct 2069714 GTCCAATACAAGAAAG--AACGTAAAAAGTTTACGCCTGAAGAAATTTCCTCCATGATTC 2069771 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742 || ||||||||||||||| || || | ||||| ||| || |||||||| || Sbjct 2069772 TAAGCAAAATGAAACAAACAGCTGAAATG-TATCTCGGAGGTACTGTCACTGATGCGGTT 2069830 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 |||||||| || ||||||||||| || |||||||| ||||| |||||||| || ||| Sbjct 2069831 ATTACTGTACCGGCATATTTTAACGACTCTCAACGACAAGCGACTAAAGACGCAGGAGCG 2069890 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||| | || | |||||| | | |||||||| ||||||||||| ||||| || |||||| Sbjct 2069891 ATTACTGGATTGAATGTTCTTAGAATTATTAACGAACCAACAGCCGCCGCTCTCGCTTAT 2069950 Query 474863 GG 474864 || Sbjct 2069951 GG 2069952 >seq1095 Length=3840556 Score = 145 bits (160), Expect = 5e-29 Identities = 248/354 (70%), Gaps = 18/354 (5%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 || || ||||||||||||||||| || ||||||||||||| |||| ||| ||||||||| Sbjct 1739121 GTATTTGATTGTTGGTTTGAATCTGGGTCTATGCCTTATGCTCAATGTCACTATCCTTTT 1739180 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATT----GCAGATTTTATAACAGA 297437 || || | || | | | ||| |||| |||||| || | ||||| | || Sbjct 1739181 GAGAA---CAAA-----AAAGAATTC-GAAGA-TATATTCCCCGCCAACTTTATTGCTGA 1739230 Query 297438 ATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATT 297497 | || |||||||| ||||| |||||||| ||| | | || || || |||||| | || Sbjct 1739231 AGGCATAGATCAAACTAGAGGCTGGTTTTACACTCTCATTGTGCTGTCCACAGCTTTGTT 1739290 Query 297498 TAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACA 297557 |||||||||| |||| ||||| | |||| | || | | || | |||||||| Sbjct 1739291 TAACAAACCACCATTCCAAAATCTGATTGCCAATGGTTTAATCCTAGCCTCAGATGGACA 1739350 Query 297558 AAAAATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAATATTTTGATGGATAAATATGG 297617 ||||||||| || | ||| || || |||||||| | | |||||||| Sbjct 1739351 AAAAATGTCTAAGCGGAAAAAGAACTACCCTGATCCTCTGGAAGTCGTCACCAAATATGG 1739410 Query 297618 TGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAA 297669 ||| ||| | || ||||| || ||| |||| |||||||||| ||||| ||| Sbjct 1739411 TGCCGATGCGTTGCGTCTCTACTTA--GTCAATTCACCTGTAGTGAAAGCAGAA 1739462 >seq2316 Length=6356476 Score = 131 bits (144), Expect = 1e-24 Identities = 462/713 (65%), Gaps = 28/713 (4%) Strand=Plus/Plus Query 592213 ATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGGCGTAAATTTGAAACACGTGT 592272 ||| ||||| ||||| || |||| ||||| ||||| ||||| | || ||| || Sbjct 2965928 ATCAGCTAACCCTTGCACTCCAATCCCAATTGGTCTGTGGCGCATGTTGGAATTCTTTGC 2965987 Query 592273 TTTTTCTACTGGATAATAATTTACATCAATAATATTATTTAAATTTCTTGTAATAATTCT 592332 || | ||||| ||| |||| ||||||||||| ||||| | ||| ||| || || | Sbjct 2965988 TTCTGGCACTGGGTAAAAATTAACATCAATAATTTTATTAAGGTTTTGTGTGATTATCTT 2966047 Query 592333 TGCGACCTTGTACAATTTATTATAATCAAACTCTGGAACACCGTTTT--CATGAATAATA 592390 || ||| | ||| || || | | || | ||||| | | | ||| | Sbjct 2966048 TGTGACTTCTCTCAACTTTGTAAAGT-------TGTAT----GTTTTATCTTCATTAACA 2966096 Query 592391 AATTTAGGTAAACAAATTGATGACAAATTACAAACTGCATATTCATCTGCAGATGAGAAT 592450 || | ||| ||| || | ||||||||||| ||| ||||||||| || | | || Sbjct 2966097 AACCTGTTCAAAGCAATAGAAGCTAAATTACAAACAGCAACTTCATCTGCTGAAGTGTAT 2966156 Query 592451 TCTACAATTTCACAACAAAGATTTGAGCCATTAATTACGCCTATATTAATCTGATTTGAT 592510 || |||||||| || | ||| || ||||| ||| | ||| | ||||| | Sbjct 2966157 TCAACAATTTCTGTGCACAAATTACTGCATTTAATGGTGCCAAGATTTTTTTGATTGCTT 2966216 Query 592511 TTTTGATTGATAGCATCTTTAAACAATATGTATGGTACACCTGTTTCAATTTGTGTTTCC 592570 ||| || || ||||||| | || || |||||| |||||||| | ||||| ||| Sbjct 2966217 TTTCTGTTACAAGAATCTTTATATAACATATATGGTGTGCCTGTTTCCACTTGTGCTTCT 2966276 Query 592571 ATTATTTTAAACCATAAATCTCTTGCTTTGATTTGTTTTATAAATCTACCCTCATTTTCA 592630 || ||| ||| | ||| ||| || ||| || | |||||| || | |||| Sbjct 2966277 ATGATTGCTTTCCACAGTTCTTGAGCTCGGACTTGCTTAACAAATCTCTTTTCCTCTTCA 2966336 Query 592631 TATT--TAAGATAA-GCTTTATTAAATTCTTCACCATATTTTCCTACAATATCTGGAC-A 592686 |||| | |||| ||| | ||||||||| || | | ||| | | || | | Sbjct 2966337 TATTGCCCATATAATGCT---TCAAATTCTTCTCCCCAACAGTCGGCAAGACCGGGGCAA 2966393 Query 592687 TTGTGATGGACACATAAGTGACCAATTTTCATCTTTTTCAACACGATCCATGAAAATATT 592746 | ||| || ||||| | ||| ||||||||||||||||||| | ||| || | || Sbjct 2966394 TCATGA-GGGCACATTAAACTCCACATTTCATCTTTTTCAACACGCTTCATAAACAAATC 2966452 Query 592747 ATTAATCATTAATCCAAGGAATAAATCTCTGGCTCTTTCCGTTTCAGCACCAGTATTTTT 592806 ||| |||| || |||| ||||||||||| | ||| |||||||| || Sbjct 2966453 TGGGATCCATAATGCATAAAATAGTTCTCTGGCTCTGACTTCTTCTTTGCCAGTATTCTT 2966512 Query 592807 CTTTAGATCAAGGAAGAAAAATATATCACCATGCCAAGGTTC--AATAAATACCGCAAAT 592864 || ||||| | || ||| | |||| ||||| ||||| | |||||| |||||| Sbjct 2966513 TTTCAGATCTAAAAACTCAAACACATCAGAGTGCCAGGGTTCTAAGTAAATA--GCAAAT 2966570 Query 592865 GAACCAGCTC---TTTTACCACCTTGATTCGCATATCTGGCTATGTCATTATA 592914 | ||| | || | || || ||||| | |||| || ||| | | ||| || Sbjct 2966571 GCACCTGGTCGTTTGTTGCCTCCTTGGTCAACATACCTTGCTGTATTATTGTA 2966623 >seq325 Length=5610163 Score = 127 bits (140), Expect = 1e-23 Identities = 364/553 (66%), Gaps = 10/553 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| || ||| | ||||| || || ||||| | || ||||| |||| || Sbjct 5119209 GCAATTGGAATAGATCTGGGAACGACGTATTCATGTGTGGGAGTGTGGCAGCATGGCAAT 5119150 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || ||||| ||||||||||| || || |||||||| || || | || || Sbjct 5119149 GTGGAGATCATCGCCAACGACCAAGGTAACAGGACCACACCATCGTACGTAGCATTCACC 5119090 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | || || || ||||| || || | || | || || || || Sbjct 5119089 GACACAGAGCGGCTGATCGGCGATGCAGCGAAGAACCAGGTGGCCCTCAACCCCAACAAC 5119030 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || || || || | |||| || || || || || || ||| |||| Sbjct 5119029 ACAGTGTTCGACGCCAAGCGGCTGATAGGACGCAAGTTCGACGACCCCAAGATCCAGCAA 5118970 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--G 474626 || ||| |||||||| || || ||||| | || || || ||||| | || ||| | Sbjct 5118969 GACATGAAGCATTGGCCGTTCAAAGTGATCAGTGAGGGCGGAAAACCCAAAATTGAAGTG 5118910 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTTTT 474684 | |||| |||||| | || ||| | ||||| | | || || ||||| | Sbjct 5118909 GAGTACA--AAGGTGAGAGGAAGAGGTTTGCGCCGGAGGAGA--TCAGCAGCATGGTGCT 5118854 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | | |||||||| | ||||| ||| |||| || || | || || || || | Sbjct 5118853 AACGAAAATGAAGGAGACCGCAGAG-GCATACCTCGGGAATACGGTGCGGGAGGCTGTCA 5118795 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || || ||||| ||||| || || || || || || || || || ||||| | Sbjct 5118794 TTACAGTGCCGGCATACTTTAACGACTCGCAGCGGCAGGCCACCAAGGACGCGGGCGCCA 5118735 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || || || || || || ||||| || ||||| || ||||| ||||| | ||||| | Sbjct 5118734 TCGCCGGCCTGAACGTATTGCGTATCATCAATGAGCCCACAGCCGCCGCGTTGGCTTACG 5118675 Query 474864 GTCTTGATAAGAA 474876 | | || ||||| Sbjct 5118674 GCTTGGACAAGAA 5118662 Score = 98.7 bits (108), Expect = 6e-15 Identities = 358/554 (65%), Gaps = 10/554 (2%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 |||||||| || ||| | ||||| || || ||||| | || ||||| |||| || Sbjct 5127799 GCAATTGGAATAGATCTGGGAACGACGTATTCATGTGTGGGAGTGTGGCAGCATGGCAAT 5127740 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || ||||| ||||||||||| || || |||||||| || || | || || Sbjct 5127739 GTGGAGATCATCGCCAACGACCAAGGTAACAGGACCACACCATCGTACGTAGCATTCACC 5127680 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | || || || ||||| || || | || | || || || || Sbjct 5127679 GACACAGAGCGGCTGATCGGCGATGCAGCGAAGAACCAGGTGGCCCTCAACCCCAACAAC 5127620 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || | || || || || | |||| || || || || || ||| ||| |||| Sbjct 5127619 ACAGTGTTCGACGCCAAGCGGCTGATAGGACGCAAGTTCGACGATCCCAAGATCCAGCAA 5127560 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACC--ATATATAGAAG 474626 || ||| |||||||| || || ||||| | || ||| || ||||| | || || | Sbjct 5127559 GACATGAAGCATTGGCCGTTCAAAGTGATCAGTGATGGCGGAAAACCCAAAATTGAGGTG 5127500 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTTTT 474684 | | | | || || | || || | ||||| | | || || ||||| | Sbjct 5127499 GAGTTTAAG--GGCGAGAAAAAGAGGTTCGCGCCGGAGGAGA--TCAGCAGCATGGTGCT 5127444 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| | ||||| ||| |||| || || || || || || || | Sbjct 5127443 GACGAAGATGAAGGAGACCGCAGAG-GCATACCTCGGCGGAGCTGTGCGGGAGGCTGTCA 5127385 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || || || || || || || || || || || || || ||||| | Sbjct 5127384 TCACAGTGCCGGCGTACTTCAACGACTCGCAGCGGCAGGCCACCAAGGACGCGGGCGCCA 5127325 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || || || || || || ||||| || ||||| || ||||| ||||| | ||||| | Sbjct 5127324 TCGCCGGCCTGAACGTGTTGCGTATCATCAATGAGCCCACAGCCGCCGCGTTGGCTTACG 5127265 Query 474864 GTCTTGATAAGAAT 474877 | | || |||||| Sbjct 5127264 GCTTGGACAAGAAT 5127251 >seq763 Length=6614576 Score = 123 bits (136), Expect = 2e-22 Identities = 247/361 (68%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 || || ||| || | || ||||| || || || || ||||| || ||| | || ||| Sbjct 6225349 GACGCCAAACGACTCATCGGTCGCAAGTTCGAGGACACCACAGTACAAGCCGACATGAAA 6225290 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCA 474637 || ||||| || |||| | | || |||||| |||||| | || ||| | | || | Sbjct 6225289 CACTGGCCCTTCGAGGTAGTCAGTGATGGTGGCAAACCAAAGATTAAAGTATCATACAAA 6225230 Query 474638 GGTGAA-ACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAA 474696 |||||| || | || | ||| || ||| || | |||||||| | | || ||||| Sbjct 6225229 GGTGAAGACAAGACCTTCTTC-CCTGAAGAAGTGAGCTCAATGGTGCTTACGAAGATGAA 6225171 Query 474697 ACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 |||| || ||| | || || || || || |||||||||| || ||||||| Sbjct 6225170 GGAAACAGCCGAGGCC-TACCTCGGTAAAACGGTGCAGAATGCAGTAATCACGGTTCCAG 6225112 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 | || || || || || ||| | || || |||||||||||||| | || | || || | Sbjct 6225111 CGTACTTCAACGACTCACAAAGACAGGCCACTAAAGATGCGGGTACCATCTCTGGCCTCA 6225052 Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 ||||| | || || || || || || || || || || |||| || |||||||| |||| Sbjct 6225051 ATGTTCTCCGGATCATCAACGAGCCGACTGCTGCTGCGATTGCGTACGGTCTTGACAAGA 6224992 Query 474876 A 474876 | Sbjct 6224991 A 6224991 >seq3427 Length=3459338 Score = 113 bits (124), Expect = 3e-19 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 || ||| || | ||||| || ||||||||||||| || |||| |||||| || ||||| Sbjct 207750 TCGTACGTTCAAAGGTTTACCCTTTAATGGGAAAACGCCGTAATGATCTCTGCCTACAAC 207691 Query 356496 ATTTAATCCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACA 356555 | | | |||||||| ||| |||| ||||||||| ||||| ||||| |||||||| ||||| Sbjct 207690 ACTAAGTCCAGACACAGCTAATGTTTTAGCTGAGTCTCCCTCAGTGAGAATTAAGGTACA 207631 >seq303 Length=4096874 Score = 102 bits (112), Expect = 5e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 817087 AAAAATTTTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTT 817146 |||| | || | ||||||||||| ||||||||||| |||||||||||| | || ||| | Sbjct 1924293 AAAAGTAATAGTTGATTTTTCATCACCAAATATTGCTAAGGAAATGCATGTCGGTCACCT 1924234 Query 817147 GAGATCTACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGT 817206 || || || || || ||||| ||||| |||| || |||| ||| || Sbjct 1924233 AAGGTCAACCATCATAGGTGATAGCATTTGTCGAATTCTAGAGTTTTTAAACCATGATGT 1924174 Query 817207 ACAAAGAATAAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 || | |||||| | ||||| ||||||||||||||||| ||||||||||| Sbjct 1924173 TTTGCGATTGAATCATTTAGGTGACTGGGGAACACAATTTGGAATGTTAATTGC 1924120 >seq1964 Length=1360 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| || ||||| || |||||||| || || ||||| || |||||||||||||| ||| Sbjct 193 TGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATC 134 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 || || ||| || || || || | | || | ||| ||||| || ||||| || Sbjct 133 TTGGCCTTAACATTCTCGATGGTGTCCGAGGGTTCAACTTCTAGGGTGATTGTTTTGCCA 74 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| ||||| || || Sbjct 73 GTCAGAGTCTTGACGAAGATCTG 51 >seq593 Length=2014934 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| || ||||| ||||||||||| ||||| || ||||| || ||||| Sbjct 755216 ATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGAATGCCCTCCTT 755275 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||||||||| || ||| ||| ||||| || || | || | | || || || | Sbjct 755276 GTCTTGAATTTTCGCTTTTACATTCTCAATTGTGTCTGATGGCTCCA-CCTCCAGTGTGA 755334 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || || || ||||| ||||| || Sbjct 755335 TAGTCTTTCCTGTTAGCGTTTTAACAAAAATCTG 755368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268013025343352