Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2316 156 5e-33 >seq2316 Length=6356476 Score = 156 bits (172), Expect = 5e-33 Identities = 902/1414 (64%), Gaps = 60/1414 (4%) Strand=Plus/Minus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| || ||| | ||| | ||||||||| |||| || ||||| || |||||||||||| Sbjct 2966965 GAAAGACCCCAGCATATGCTGATGCGGGTCTCAATTGGAATCCATGGTGAAGACATTGAT 2966906 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 75325 || | | | || || ||| || |||| || || | || || | || || Sbjct 2966905 TCAGCCATTGAAACCTACAACTTATTGTCTGAAAAATACTTTACACATGCCAGTCCCACA 2966846 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 | ||| ||| | || || ||||| || |||| ||||||||| || || | || Sbjct 2966845 TTATTCTCTGCAGCAACTCCGAGACCACAATTGTCTTCTTGCTTCCTCATAGCTATGAAA 2966786 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || ||| || | ||||| |||| || || | | ||||| ||||||||| | Sbjct 2966785 GATGACAGCATTGAAGGTATATATGACACACTAAAACAATGTGCATTAATCTCAAAATCA 2966726 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 ||||| || ||||| | || | ||| | | ||||| || || ||| || Sbjct 2966725 GCTGGTGGCATTGGACTACATGTTCATTGTATTAGAGCAAAAGGTACTTATATAGCAGGT 2966666 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| ||| ||||| || | |||||| | || || | || ||||| | Sbjct 2966665 ACTAACGGTGTATCCAATGGTCTTGTACCAATGTTGCGAGTGTACAATAATACAGCAAGG 2966606 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATG 75621 ||||| | |||| | ||| | | | ||| ||| || | ||||| ||||| || Sbjct 2966605 TATGTTGACCAAG-GAGGCAACAAACGACCAGGTGCATTTGCTATTTACTTAGAACCCTG 2966547 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAA----GGTGACGAAGAGG 75677 ||| | ||| | | ||||| || || | || || || || | ||||| | Sbjct 2966546 GCACTCTGATGTGTTTGAGTT--TTTAGATCTGAA--AAAGAATACTGGCAAAGAAGAAG 2966491 Query 75678 CTCGGTGT-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || | | ||||| || |||| | | ||||| ||||| | || |||||||| ||| Sbjct 2966490 -TCAGAGCCAGAGAACTATTTTATGCATTATGGATCCCAGATTTGTTTATGAAGCGTGTT 2966432 Query 75737 GAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAG---GCACCAGGTCTCTCCGAC 75793 || | | || |||| ||| ||| | || | || || ||||| ||||| Sbjct 2966431 GAAAAAGATGA--AATGTGGAGTTTAATGTGCCCTCATGATTGCCCC-GGTCTTGCCGAC 2966375 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGA---GCC 75850 ||| || || |||||||| | || | ||||||||||| ||| | Sbjct 2966374 TGTTGGGGAGAAGAATTTGAAGCATTATATGGGCAATATGAAGAGGAAAAGAGATTTGTT 2966315 Query 75851 AATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 || || | || | ||| || | ||||| || || | || |||| ||| || Sbjct 2966314 AA-GCAA--GTCCGAGCTCAAGAACTGTGGAAAGCAATCATAGAAGCACAAGTGGAAACA 2966258 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 || |||||||||||| | || || ||| ||||||||| || || || ||||| ||| | Sbjct 2966257 GGCACACCATATATGTTATATAAAGATTCTTGTAACAGAAAAAGCAATCAAAAAAATCTT 2966198 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAG--GATG 76028 || || || || || ||| | ||||| |||||| | || ||||| | || |||| Sbjct 2966197 GGCACCATTAAATGCAGTAATTTGTGCACAGAAATTGTTGAATACACT--TCAGCAGATG 2966140 Query 76029 AGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTC 76088 | |||||||| ||||| || || || || | | || ||| |||||||| | Sbjct 2966139 AAGTTGCTGTTTGTAATTTAGCTTCTATTGCTTTGAACAGGTTTGTTAATGAAGATAAA- 2966081 Query 76089 GCACTTTTGATTATGAAAAACTTCAT-GAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 || | | | | | ||| || | ||| |||||||||| | || |||| || || Sbjct 2966080 --ACATACAACTTT-ACAAAGTTGAGAGAAGTCACAAAGATAATCACACAAAACCTTAAT 2966024 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCGACA 76206 | | ||||| |||||||| || || ||| || || || || ||||| || Sbjct 2966023 AAAATTATTGATGTTAATTTTTACCCAGTGCCAGAA-GCAAAGAATTCCAACATGCGCCA 2965965 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGC 76266 |||||| ||||| | || || ||||| | || ||| |||| || || | ||| Sbjct 2965964 CAGACCAATTGGGATTGGAGTGCAAGGGTTAGCTGATACATTTGTTCTGA-----TGCGC 2965910 Query 76267 ATT--TGATTCAGATGA--AGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTAT 76321 ||| | || | ||| || ||| | | | || | ||||| ||||| || ||| Sbjct 2965909 ATTCCTTATGAAAGTGACAAGGCAATTAAACTTAACCAACAAATCTTCGAAACGATATAT 2965850 Query 76322 CACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTT 76381 ||| | | | || || ||||| ||| |||| || |||| ||| |||| | Sbjct 2965849 TACGGAGCATTAGAAGCCAGTTGCGAACTGGCGCAAAGAGAAGGAGTTTATAGTACATAT 2965790 Query 76382 GAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC-CAA 76440 || || ||| || |||||| | | || | ||| |||||||| | |||| | | Sbjct 2965789 GAAGGAAGTCCAGCAAGCCAAGGCATTTTGCAATATGACATGTGGGA---TAAAACTCCA 2965733 Query 76441 GCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCAT---CAAGGAGAAGGGTCTTCGT 76495 || | || | ||||| |||| | || ||| || ||| | | ||| || || Sbjct 2965732 TCTGATCTCTGGGACTGGTCTGTTTTAAAAGAAAAAATTGCCAA--ACATGGG-CTGCGC 2965676 Query 76496 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 76555 || ||||| | || |||||||| ||||| || || || ||||||||||| || ||| Sbjct 2965675 AATTCGCTTTTATTAGCTCCAATGCCTACAGCGTCTACAGCCCAAATCTTGGGAAACAAT 2965616 Query 76556 GAATGCTTTGAACCATACACAACAAACATCTACC 76589 |||| ||||||||||| ||| ||||||| |||| Sbjct 2965615 GAATCCTTTGAACCATTTACATCAAACATTTACC 2965582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596540711117120