Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2583 114 2e-19 seq751 111 2e-18 seq447 98.7 1e-14 >seq2583 Length=303979 Score = 114 bits (126), Expect = 2e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 ||||| |||| || |||||| | | ||||| |||||||| ||| || | ||| | | Sbjct 81602 CTGCCTGCCGGGCGGCACAAGATAGTGATCCTGGACGAGGCGGACAGCATGACGGAAGGG 81543 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||| |||||| |||||||||| | || ||||||||||||| ||||| || Sbjct 81542 GCGCAGCAGGCGCTGCGGCGCACCATGGAACTGTACGCCAACACGACGCGGTTTGCGCTC 81483 Query 1574178 GCGTGCAACACGTCGTCGATGG--TCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGC 1574235 || ||| | || | ||| | |||||||| || | || |||||||||| | |||| Sbjct 81482 GC-TGCCA-ACAACAGCGAGCGCATCATCGAGCCCATACAGTCTCGCTGCGCCGTGCTGC 81425 Query 1574236 GCTTTGTGCGCCTGGGTGACGCCCAGATACGCGC 1574269 ||| ||| || ||||| ||||||| ||| Sbjct 81424 GCTACTCGCGGCTCACCGACGCACAGATACTCGC 81391 >seq751 Length=1288 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| | ||| ||| ||| | ||| | ||||| ||||| | ||| | || || Sbjct 678 GCTTGGCTAATTCACCGGGCAGTAGCAGTCTCACGGATGTCTGCACCTCCCTCGATGTGA 737 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| |||||| | | || || |||| | Sbjct 738 TGGTTGATCGCTTGTTGTAGTGAGCGAGACGAGAGGCCTCAGCCGCAATACGCTCGAAGA 797 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||||| | |||| |||| || || |||||| | Sbjct 798 TGTCGTTGACGAAAGAGTTCATGATAGACATGGCCTTGCTGGATATACCAGTGTCGGGAT 857 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||| ||||| ||| Sbjct 858 GCACTTGTTTGAGCACTTTGTAAATG 883 >seq447 Length=7652121 Score = 98.7 bits (108), Expect = 1e-14 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 |||||||| || || || || ||||||| ||| |||| | ||||| || ||| Sbjct 4106255 AAGCGCACTGATGATATTTCATCGTGGGATGCGGACTTTTTAAAAGTCGACCAAGGCACT 4106314 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 | ||||| || || | || || || ||||| ||||| ||| | | || ||| | Sbjct 4106315 TTGTTTGAATTAATATTGGCTGCTAATTACCTTGACATTAAGGGTTTACTGGATGTGACA 4106374 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 || || |||| ||||| ||||||||||| ||| | || || ||||| ||||| |||||| Sbjct 4106375 TGTAAAACTGTAGCCAATATGATCAAGGGTAAGACACCTGAAGAGATTCGCAAAACCTTT 4106434 Query 1592288 AACATCAAG 1592296 || |||||| Sbjct 4106435 AATATCAAG 4106443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106821281418058