Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq751 125 1e-22 seq2583 113 7e-19 seq221 86.0 1e-10 >seq751 Length=1288 Score = 125 bits (138), Expect = 1e-22 Identities = 176/245 (72%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || ||||||||||| || || || ||| |||||| |||| | ||| ||| ||| Sbjct 639 TGTATTTAGTGACGGCCTTTGTGCCTTCACTGACTGCGTGCTTGGCTAATTCACCGGGCA 698 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | ||| | ||||| ||||| | ||| | | ||| || ||||||| |||| Sbjct 699 GTAGCAGTCTCACGGATGTCTGCACCTCCCTCGATGTGATGGTTGATCGCTTGTTGTAGT 758 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || |||||| | | || || |||| ||||||||||| || ||||| Sbjct 759 GAGCG--AGACGAGAGGCCTCAGCCGCAATACGCTCGAAGATGTCGTTGACGAAAGAGTT 816 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| |||| || || |||||| ||||| || |||||||| || Sbjct 817 CATGATAGACATGGCCTTGCTGGATATACCAGTGTCGGGATGCACTTGTTTGAGCACTTT 876 Query 1485708 GTAAA 1485712 ||||| Sbjct 877 GTAAA 881 >seq2583 Length=303979 Score = 113 bits (124), Expect = 7e-19 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 ||||| |||| || |||||| | | ||||| || ||||| ||| || | ||| | | Sbjct 81602 CTGCCTGCCGGGCGGCACAAGATAGTGATCCTGGACGAGGCGGACAGCATGACGGAAGGG 81543 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || |||||||| || || ||||||||| |||| |||||||||||||||||||||| Sbjct 81542 GCGCAGCAGGCGCTGCGGCGCACCATGGAACTGTACGCCAACACGACGCGGTTTGCGCTC 81483 Query 2019315 GCCTGCAACACGTCGTCGATGG--TCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGC 2019372 | |||| | || | ||| | ||||||| || | ||| || |||||| | ||| Sbjct 81482 G-CTGCCA-ACAACAGCGAGCGCATCATCGAGCCCATACAGTCTCGCTGCGCCGTGCTGC 81425 Query 2019373 GCTTTGCGCGCCTCACCGACGCCCAGAT 2019400 ||| |||| ||||||||||| ||||| Sbjct 81424 GCTACTCGCGGCTCACCGACGCACAGAT 81397 >seq221 Length=129838 Score = 86.0 bits (94), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843 |||||||||||||||| ||| ||||| | || ||||| | ||||||||||||||||| Sbjct 46722 GCCTCGGTGGCGCAGTAGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCGATC 46663 Query 1812844 CTCACCCGAGGTATATC 1812860 |||||||| || ||||| Sbjct 46662 CTCACCCGGGGCATATC 46646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915834304950686