Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq593 105 1e-17 seq2316 93.3 7e-14 >seq593 Length=2014934 Score = 105 bits (116), Expect = 1e-17 Identities = 161/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || || | ||||| |||||||||| || || || | || || || | || | Sbjct 755370 TGCAGATTTTTGTTAAAACGCTAACAGGAAAGACTATCACACTGGAGGTGGAGCCATCA- 755312 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| | ||||||||| ||||| ||| || || |||||||| || ||||| Sbjct 755311 GACACAATTGAGAATGTAAAAGCGAAAATTCAAGACAAGGAGGGCATTCCCCCAGATCAG 755252 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || ||||| ||||| || | || ||| | | || | |||| || ||| Sbjct 755251 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCAGACTACAAT 755192 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 || ||||| |||||||| | || || || | || ||||||||||| Sbjct 755191 ATTCAAAAGGAATCGACGCTTCACTTGGTTCTTCGTTTAAGAGGAGG 755145 Score = 96.9 bits (106), Expect = 5e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || || ||||| || || || || | || || || | | Sbjct 755598 TGCAGATCTTCGTTAAGACCTTGACAGGCAAGACTATCACATTAGAGGTTGAGCCATCTG 755539 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| || |||||| ||| |||||||||||||| || || || | Sbjct 755538 ACACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAAGAAGGCATTCCCCCAGACCAGC 755479 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| || ||||| | || ||| | || || ||||||| || | Sbjct 755478 AGAGATTGATCTTTGCTGGCAAACAGCTTGAAGATGGACGCACATTGTCAGATTACAACA 755419 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | || ||||| | || | |||||||| Sbjct 755418 TCCAGAAAGAATCTACTCTTCACTTAGTGCTCCGTCTTAGAGGAGG 755373 >seq2316 Length=6356476 Score = 93.3 bits (102), Expect = 7e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| | || || ||||| || || | || || ||| | Sbjct 2659346 TGCAGATCTTCGTAAAAACCCTCACGGGTAAAACCATAACGTTAGAGGTTGAAGCCTCTG 2659405 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||||||| ||||| ||| ||||| |||||||| || ||||| | Sbjct 2659406 ACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCCCCAGATCAGC 2659465 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| | || || || || ||||| ||||| ||| | || || | || || || | Sbjct 2659466 AAAGGTTGATCTTCGCCGGCAAACAGTTAGAAGATGGACGTACATTGTCCGACTACAACA 2659525 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAA 146260 | || || ||||| || | || || || || | | |||||||||| Sbjct 2659526 TCCAGAAGGAATCAACACTTCACTTGGTGTTGAGGCTGCGAGGAGGTAA 2659574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786128329892080