Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq447 84.2 3e-11 >seq447 Length=7652121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 53079 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAG 53138 |||||||||| |||||||||||||||||||||||||||||| | || |||||| ||| Sbjct 2005539 CTTACAATGCTGATTTTGATGGAGATGAAATGAATTTACATGTCCCACAGTCTATGGAAA 2005598 Query 53139 CTACTGCAGAA 53149 || ||||||| Sbjct 2005599 CTCGTGCAGAA 2005609 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 53079 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAG 53138 |||||||||| |||||||||||||||||||||||||||||| | || |||||| ||| Sbjct 2011952 CTTACAATGCTGATTTTGATGGAGATGAAATGAATTTACATGTCCCACAGTCTATGGAAA 2012011 Query 53139 CTACTGCAGAA 53149 || ||||||| Sbjct 2012012 CTCGTGCAGAA 2012022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655248268066000