Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq336 486 1e-131 seq2205 230 2e-54 seq763 203 2e-46 seq1872 183 2e-40 seq3427 134 1e-25 seq303 107 1e-17 >seq336 Length=3672263 Score = 486 bits (538), Expect = 1e-131 Identities = 999/1466 (68%), Gaps = 31/1466 (2%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 || || || |||||||| || || | |||||||| || || |||||||| || || | Sbjct 247347 ACGTTGAGGATACCATTAGCGTCGATGTCAAATGTTACATCTATTTGAGGTACACCGCGA 247406 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCC---CAGATTATTATTATCTTTAGTG 281548 | |||||||| || || | || ||| ||||| |||||||||||| | | || Sbjct 247407 GGTGCAGGTGGTATACCAGTTAGATCAAAAGTTCCTAACAGATTATTATTCT---TGGTC 247463 Query 281549 AATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTT 281608 | | | |||||| || | | ||| || | || | | ||||||||| ||||| || Sbjct 247464 ATTGCCCTTTCACCTTCATACACTTGAATGTTGACAGCTGGTTGATTATCCGAATAGGTG 247523 Query 281609 GTAAATACTCTGG-ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCAT 281667 ||||| | ||||| | | | | ||||| ||| | | ||| | || | || || ||||| Sbjct 247524 GTAAA-AGTCTGGGAGTGTGTGCAAGGGATTTTAGCGTTGCGTTCGACTATCTTCGTCAT 247582 Query 281668 AATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATT 281727 || ||||||||||||||| | ||| ||||| | || |||||||| |||| | | || Sbjct 247583 AACACCACCAGCTGTTTCAATACCTAGAGATAAGGGGGTGACATCGACTAAAAGCACATC 247642 Query 281728 TTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGC 281787 |||| || || | | || | || || || |||| ||||||||||| || Sbjct 247643 CTGAATCTTGGAATGACGCTCCCCGCTTAATATTGCAGCCTGAACTGCAGCACCATAAGC 247702 Query 281788 AACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT-GAAA 281846 ||||| ||||||||||||| || | ||| |||||||||||||| || |||||| | || Sbjct 247703 CACAGCCTCATCAGGATTAATAGATAAATTGAGTTTTTTACCATTAAAGAAATTTTGTAA 247762 Query 281847 GAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCT 281906 || || | | |||||| ||||||| ||| || ||||| | ||||| |||| | Sbjct 247763 TAAATTCTGA-ATCTTAGGTATACGAGTTGAGCCCCCAACCAGAACAATATCATTGATAG 247821 Query 281907 GTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAA 281966 ||| |||| ||| | ||| |||| |||| || || || || ||| | || Sbjct 247822 AGCTTTTGTCCATTTTGGCATCATTTAAAGCTTTCTCTACTGGCTCTAGAGTGATACGAA 247881 Query 281967 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGA-GTGACATTATAATCAATT 282025 | || |||| ||||| |||||| ||||| | || |||| | | | || || Sbjct 247882 ATAAATCTGCGTTTAGTTCCTCGAATCGTGCTCTTGAAATTCGTGAAAAGA-AGTCTATA 247940 Query 282026 CCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTA 282085 || ||| | | || ||| | ||| || | | || ||| ||||| |||| |||||| Sbjct 247941 CCCTCGTAAAGAGCATCGATTTCTATATTTGCTTCAGTACTGGAAGAAAGTGTTCGTTTA 248000 Query 282086 GCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAA-ATCTGT 282144 || ||||| || || | | | || | ||| ||| | | |||| | |||| | Sbjct 248001 GCTCGTTCGGCAGCAGTGCGCAAGCGACGAAGTGCTCTTGG-GTTCGATTTGATATCTTT 248059 Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTA-CAAGACGATTATCAAAATCTT 282203 |||||| ||||| || || || ||| || | | |||| | | | ||| |||||||||| Sbjct 248060 TTTATACTTTCTTTTAAACTCGTCAGCA-AGAAAGTTAACTAATCTATTGTCAAAATCTT 248118 Query 282204 CACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAG 282263 |||| || | | ||| | ||| | |||||| |||||| ||||| | ||||| | Sbjct 248119 CACCACCAAGATGAGTGTCTCCGGCTGTAGCTTTTACTTCAAAAAGAGAACCTTCATCAA 248178 Query 282264 ACAAAAGAGTA---ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTT 282320 | ||| | |||||| || || || || | |||||| || | || || || Sbjct 248179 TCGTAAGGATGGATACATCAAAAGTACCGCCTCCTAAATCAAAGATTAAGACTTTGCGTT 248238 Query 282321 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 282380 || | | || |||||||| || || || ||||| ||||| ||||| |||||||| | Sbjct 248239 CTCCTTTTAAATTCTTATCAAGGCCGTAAGCCAAAGCTGCAGCCGTTGGCTCATTAATTA 248298 Query 282381 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 282440 |||| | ||| || | || ||||| || ||||||||||| |||||||| || || | Sbjct 248299 TTCTGAGAACGTTTAATCCGGCAATAGCACCCGCATCTTTAGTAGCTTGTCTCTGAGAGT 248358 Query 282441 CGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGC 282500 | || || || ||||| || |||||||| || | ||||||| || || | ||| | Sbjct 248359 CATTGAAGTAAGCAGGTACTGTAATAACTGCTTTAGTTACTTTGTTGCCTAGATATGATT 248418 Query 282501 TTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA-ATTTGTTCTGGAG-----AAT 282554 ||||| | ||||||||| ||| | ||| | || | || ||||||| | | Sbjct 248419 CAGCTGTCTCTTTCATTTTTAGTAACACCAT-GCTGCTTACTTCCTCTGGAGTGAACACT 248477 Query 282555 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 282614 |||||| ||| ||| | | ||||||| || | ||||| | | || | || Sbjct 248478 TTTGCTT---TTCCTTT--AAACGATACTTGAATTTTAGGTTTCCCGTTATCGTTGACAA 248532 Query 282615 CTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 282674 ||||||| ||||||| || || ||| || ||| | | |||| | | | | |||| Sbjct 248533 CTTTAAAGGGCCAATGCTTTATGTCTTGCTGTACAGTAGGATCATCATACTTACGTCCAA 248592 Query 282675 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTG 282734 | || || || ||||| ||||||||||| || || | || | |||| |||||||| Sbjct 248593 TCAAACGCTTGGCATCGAAAATAGTATTATCAGGGTTCATGGCTACCTGATTTTTGGCTG 248652 Query 282735 CATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTAC 282794 ||||||| || || |||| || || || || | |||||| || ||||||||||| || | Sbjct 248653 CATCTCCTATGAGCCGTTCGGTGTCAGTGAACGCAACATAAGACGGAGTTGTGCGGTTTC 248712 Query 282795 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 282854 ||||||| || ||||| || || || ||||||| |||||| | || ||||| | | | Sbjct 248713 CTTGATCGTTTGCAATTATGTCTACGTTACCATGTTGCCACGCGCCCACACAGGAATATG 248772 Query 282855 TTGTTCCTAAATCAATACCAATAGCA 282880 ||||||| ||||||||||| | |||| Sbjct 248773 TTGTTCCCAAATCAATACCCACAGCA 248798 Score = 107 bits (118), Expect = 1e-17 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 ||||| || | |||||| || ||||| |||||||||||| | ||||| | ||| || ||| Sbjct 248262 CCGTAAGCCAAAGCTGCAGCCGTTGGCTCATTAATTATTCTGAGAACGTTTAATCCGGCA 248321 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || | | | ||| ||| ||||||||||| | |||||| || || || ||||| ||| Sbjct 248322 ATAGCACCCGCATCTTTAGTAGCTTGTCTCTGAGAGTCATTGAAGTAAGCAGGTACTGTA 248381 Query 86239 ATAACTGCTTTA 86250 |||||||||||| Sbjct 248382 ATAACTGCTTTA 248393 >seq2205 Length=3731788 Score = 230 bits (254), Expect = 2e-54 Identities = 525/777 (68%), Gaps = 21/777 (3%) Strand=Plus/Minus Query 281965 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 282024 ||| || || ||||| | ||| || ||| ||||||||| || || || |||| || Sbjct 2070334 AAATAAATCCGAACACAATTCCTCAAATCGAGCTCTAGTTAGCTTGGAATAGAAATCTAT 2070275 Query 282025 TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTT 282084 |||||| || | || | ||| || ||| || || ||||| |||| ||||| Sbjct 2070274 TCCTTCATGCAGGGCGTCTATTTCTATACTAGCTTCTGTATTCGAAGAAAGTGTTCGTTT 2070215 Query 282085 AGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG-GCTTTTGCTGATTG--ATTCAAATC 282141 ||| | ||| ||||| || || ||||||| |||| ||||| | ||||| | | | || Sbjct 2070214 AGCTCTTTCGCATGCAGTTCTCAGTCTTC-TAAGAGCTTTCG--GATTGCCAGTAATATT 2070158 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGACGATTATCAAAAT 282200 | | ||| |||| | | || |||| | | | || | || | || | ||||||| Sbjct 2070157 TTTCTTAAATTTCCGTTCAAATTCTTGACTGAAATGATCT-ACCATTCGGCTGTCAAAAT 2070099 Query 282201 CTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAA 282260 | || ||||| | | ||| | |||| || | | |||||| ||| | | |||| Sbjct 2070098 CCTCGCCTCCAAGGTGAGTGTCACCTGCTGTTGATTTTACTTCGAACAATGATCCTTCTG 2070039 Query 282261 GAGACAAAAGAGT---AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 | | ||| | ||| || || ||||| || | ||||| || ||||||||| Sbjct 2070038 AAATCTGAAGTATCGAAACGTCGAAAGTACCACCGCCAAGGTCAAATATTAGTACATTCT 2069979 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 | || | | | ||| || | ||||| || | ||| || || |||||||| |||| Sbjct 2069978 TCTCACCTTTTAAATCTTTGTCTAAGCCATAAGCGAGAGCGGCGGCTGTTGGTTCGTTAA 2069919 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 ||||||| | |||||| | |||| ||| |||||| |||||||| ||||||| ||| | Sbjct 2069918 TAATTCTAAGAACATTCAATCCAGTAATCGCTCCTGCGTCTTTAGTCGCTTGTCGTTGAG 2069859 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG 282497 | |||||||||||||| || ||||||||||| ||||| || || ||| | ||| Sbjct 2069858 AGTCGTTAAAATATGCCGGTACAGTAATAACCGCATCAGTGACAGTACCTCCGAGATA-- 2069801 Query 282498 CGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATA 282555 | || ||||||||||||||||| |||| |||||| || ||||||| ||| || | | | Sbjct 2069800 CATTTCAGCTGTTTGTTTCATTTTGCTTAGAATCATGGAGGAAATTTCTTCAGGCGTAAA 2069741 Query 282556 TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTT---ATTACCAACATTAAT 282612 | || ||| || | ||| || ||| || || |||| | || | Sbjct 2069740 CTTTTTACGTTCTTTCTTGTATTGGACCACAATTCCCGGCTTCCCATTATC-CGAT--AC 2069684 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 ||||| |||||||||| ||| || ||| ||||| | | |||||||| | ||| || Sbjct 2069683 AACTTCGAATGGCCAATGTTTAATGTCTTGTTGAAGTTTAGGATCATTAAACTTTCTTCC 2069624 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729 || | |||||| |||||||| |||||||| | ||||| | ||| ||| |||| Sbjct 2069623 GATCATTCGTTTCGCATCAAAGATAGTATTTTTCGGATTCATAGCAATCTGAAATTT 2069567 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 86114 CTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAAC 86173 |||| || || || ||||| || || |||||||| ||||| ||| ||||||||| || | Sbjct 2069957 CTAAGCCATAAGCGAGAGCGGCGGCTGTTGGTTCGTTAATAATTCTAAGAACATTCAATC 2069898 Query 86174 CCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTA 86233 | | ||| | | || ||| ||||||| || | ||| ||||||||||| |||| Sbjct 2069897 CAGTAATCGCTCCTGCGTCTTTAGTCGCTTGTCGTTGAGAGTCGTTAAAATATGCCGGTA 2069838 Query 86234 CAGTAATAACTGC 86246 |||||||||| || Sbjct 2069837 CAGTAATAACCGC 2069825 >seq763 Length=6614576 Score = 203 bits (224), Expect = 2e-46 Identities = 806/1252 (64%), Gaps = 16/1252 (1%) Strand=Plus/Plus Query 281405 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 281464 ||||| || || || || |||||| ||| || || || || || || || | || || Sbjct 6224064 TTGTTGGTGGACTTCTCGACGGCAGACACGTTCAGGATGCCGTTAGCGTCGATGTCGAAG 6224123 Query 281465 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 281524 |||||||| || || || || || | | || || ||||| || || | || | Sbjct 6224124 GTGACTTCGATCTGCGGCACGCCGCGGGGCGCGGGCGGGATGCCGGTCAGCTCGAACTTG 6224183 Query 281525 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 281584 || ||| || || || || || | || || ||||| || | |||||| || Sbjct 6224184 CCGAGAAGGTTGTTGTCCTTGGTCATGGCGCGCTCGCCCTCAAACACTTGGATCAGCACA 6224243 Query 281585 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGT 281643 ||| ||| ||||| || || || || || ||||| ||| ||| || || || || Sbjct 6224244 CCAGGTTGGTTATCAGAGTAGGTGGTGAAGG-TCTGGGTTTGTTTGGTGGGGATGGTGGT 6224302 Query 281644 GTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGG 281703 ||| | | || | | ||||| | || || || || || | ||| || || || || Sbjct 6224303 GTTGCGCTTGATGAGCGTAGTCATGACGCCGCCGGCGGTCTCGATACCGAGCGAGAGGGG 6224362 Query 281704 AGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGC 281763 || || || | || | | | || | | || | | || || ||||| Sbjct 6224363 CGTCACGTCGAGCAGCAGCAGGTCCTGCACCTCCTCGGACTTGTCGCCGTGCAGGATAGC 6224422 Query 281764 TGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTT 281823 || || | || ||||| || || || || || || ||||| | | || || || | Sbjct 6224423 AGCCTGGACGGCCGCACCGTAGGCGACGGCCTCGTCGGGATTGATGGATTTGTTCAGCTC 6224482 Query 281824 TTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTC 281882 || || ||||| || | ||| || | ||| || || ||||| |||| ||||| | Sbjct 6224483 CTTGCCGTTGAAGAAGTCCTGAAGGAGCT-TCTGCACTTTGGGAATGCGAGTGGATCCAC 6224541 Query 281883 CAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTT 281942 | || | ||| || || || | || || || |||| ||| | || || || | Sbjct 6224542 CGACCAGTACGATGTCGTGGATTTGGGACTTGTCCATTTTGGCGTCACGTAGGGACTTCT 6224601 Query 281943 CAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAG 282002 | ||||| || | || ||| |||| ||||| || || ||||| || | | Sbjct 6224602 CTACGGGCTCCATGGTAGATCTGAACAGGTCTGCGTTCAGCTCCTCGAAGCGGGCACGGG 6224661 Query 282003 TAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 282060 | || ||| | || || || || || ||||||| |||||| | |||||| | | || Sbjct 6224662 T--GATGGACGTGTAGAAGTCGATACCCTCGAACAGAGAATCGATTTCAATGCTGGCCTG 6224719 Query 282061 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 282120 ||| |||||||| || | | || || | || || || || | | || || | || Sbjct 6224720 AGTGGAAGAAGACAGGGTCCTCTTCGCCCTCTCGCAAGCCGTGCGCAACCTACGGAGCGC 6224779 Query 282121 TTTTGCTGATTGATTCAAA--TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCAT 282178 | | || ||| | || || |||| ||||| ||||| || || | ||| | Sbjct 6224780 TCT--CTTGTTGGTGGTAAGGTCCTTTTTGTATTTCCTCTTAAACTCCTGGACAAAGTGG 6224837 Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 | || | ||| || || || || ||||||||||| | ||| | || | |||| | | Sbjct 6224838 TTAACCATACGGTTGTCGAAGTCCTCACCTCCCAAGTGAGTGTCACCGGCGGTAGATTTC 6224897 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 || | ||| | ||||| || | || || | || |||||| || ||||| || | | Sbjct 6224898 ACCTCGAAGATGCCATCCTCGATAGTCAGGATAGACACATCAAAAGTACCACCGCCGAGA 6224957 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || |||||||||||||| |||| || || || |||||||| ||||||| ||| Sbjct 6224958 TCGAAAATAAGTACATTACGTTCTCCACCTCCCTTCTTGTCAAGACCGTACGCAATCGCA 6225017 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 |||||||| || || || || || | | |||||| || |||| || | || |||||| Sbjct 6225018 GCAGCAGTCGGCTCGTTGATGATCCGGAGAACATTGAGGCCAGAGATGGTACCCGCATCT 6225077 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA-TCTGT 282477 |||||||| ||||||||||| ||||| || || || ||||| || || || ||| |||| Sbjct 6225078 TTAGTGGCCTGTCTTTGTGAGTCGTTGAAGTACGCTGGAACCGTGATTACTGCATTCTG- 6225136 Query 282478 TACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 || ||| || | || || ||||||| ||||| || | | | |||||| Sbjct 6225137 CACCGTTTTACCGAGGTAGGCCTCGGCTGTTTCCTTCATCTTCGTAAGCACCATTGAGCT 6225196 Query 282538 AATTTGTTCTGGAGAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTT 282596 | || ||| || ||| | | |||| |||| || |||||||||| || | ||||| Sbjct 6225197 CACTTCTTCAGG-GAAGAAGGTCTTGTCTTCACCTTTGTATGATACTTTAATCTTTGGTT 6225255 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAAC 282648 | |||| || | | || | || ||||| | |||||| || | ||| || Sbjct 6225256 TGCCACCATCACTGACTACCTCGAAGGGCCAGTGTTTCATGTCGGCTTGTAC 6225307 >seq1872 Length=2557183 Score = 183 bits (202), Expect = 2e-40 Identities = 579/882 (66%), Gaps = 23/882 (3%) Strand=Plus/Plus Query 281629 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 |||||| |||| |||||||| ||| || || ||| ||| ||||| | |||||| |||| Sbjct 760102 ACAAGGGATTGGTGTGTTTCGATCTATGATTTTGTACATCATACCCCTAGCTGTCTCTAC 760161 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT- 281747 |||||| || | || ||||||||||||| | ||||| | ||| | | ||| Sbjct 760162 ACCAAGTGACAATGGCACCACATCAACTAGGAGCAAATTTTCTATTTTCTTGTGTCTTTC 760221 Query 281748 GACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAA 281807 | || | || | |||| ||||| || ||||||||| | || || ||||| || || || | Sbjct 760222 GCCCGATAATA-TAGCAGCTTGTATTGCAGCACCACAAGCTACTGCTTCTTCGGGGTTCA 760280 Query 281808 CAGTT--TCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAG 281864 | ||| | || ||| | | ||||| ||| | | ||| | || || || || ||| | Sbjct 760281 CTGTTGATGATATAGCTCT--ACCATCGAAGTATTCTTGCACTAACTT-TCGTATCTTTG 760337 Query 281865 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 281924 | || | | || || | | || ||| || | | | | ||| | || | | | Sbjct 760338 GTATTCTCGTACTACCCCCTATAAGTATAATATCGTTGATGTATTCTTTCTTCATTCTGG 760397 Query 281925 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTT 281984 ||| ||| ||| ||| | || | | || |||||| |||||||| | || Sbjct 760398 CTTCCTCCAAAGCTTGTTCGATATATTTTATCGTATCTAAAAACAAATCTGAACATAATT 760457 Query 281985 CTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC-AATTCCTTCGAACAAAGAATCA 282043 |||||||| || || | | | | || || ||||| || | ||| || || Sbjct 760458 CTTCGAATAGGCACCTGGTTACTTTACCCGTGTAGTCTAATTCGTT-GTACAGCGACTCT 760516 Query 282044 ACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTC 282103 | || | || | || ||| | ||| | ||| |||||| || | ||| || Sbjct 760517 ATTTGTACTGTTGCTTCAGTTGCAGATGTTAGAATACGTTTTGCTCTCTCAGCGGCAACT 760576 Query 282104 CTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTA--TATTTTCTCTTGA 282161 | |||| || || |||||| | || | | ||||| || | || | | || | Sbjct 760577 TTAAGTCGACGAAAAGCTTTTCC--ATCGCCTATAATCTCTTCTCCGTAACGTTTTTTAA 760634 Query 282162 AATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTAT 282221 |||||||| | | | | | |||||||| ||||||||||| || || | || | Sbjct 760635 AATCTTCAGCGAAGTAAGCCGCTAGACGATTGTCAAAATCTTCTCCACCGAGACGTGTGT 760694 Query 282222 TTCCTGACGTAGCTCTTACTTGGAAAA---GTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 | || | || | | | |||| | ||| |||| | | || |||| || ||||| Sbjct 760695 TGCCAGCAGTCGATTTCACTTCGTAAACCGGTCCTTTAGATATAGTTAAAACAGAAACAT 760754 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGT--TTTT 282336 | || ||||| || | |||| | || | |||||| ||||| |||| | |||| Sbjct 760755 CCAACGTGCCACCGCCTAAATCATATATCAATACATT--TTTCTCACTCTTAATATTTTT 760812 Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 ||| | |||||| || || ||||| || ||||| ||||||| |||||| ||||| |||| Sbjct 760813 ATCCAAACCATAAGCTAACGCAGCTGCGGTTGGCTCATTAACAATTCTTAAAACGTTAAA 760872 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 ||||||||| ||| ||| | |||| || |||||||| ||||||||||||| || || Sbjct 760873 ACCAGCAATCACTCCCGCAGCCCTAGTAGCCTGTCTTTGACAATCGTTAAAATACGCGGG 760932 Query 282457 AACAGTAATAACGGCATCTGTTAC--TTCTTTTCCAATATAA 282496 ||| || ||||| |||| ||| | |||||| |||| || Sbjct 760933 AACCGTTATAACTACATCATCTACCTTCCTTTTCAAATACAA 760974 >seq3427 Length=3459338 Score = 134 bits (148), Expect = 1e-25 Identities = 217/312 (70%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 |||||| ||||| | || |||||||| |||||||||||||| ||| ||||||| |||| | Sbjct 207631 TGTACCTTAATTCTCACTGAGGGAGACTCAGCTAAAACATTAGCTGTGTCTGGACTTAGT 207690 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 ||| | || |||||| |||| || ||||||||| | | || |||| |||||| || | Sbjct 207691 GTTGTAGGCAGAGATCATTACGGCGTTTTCCCATTAAAGGGTAAACCTTTGAACGTACGA 207750 Query 400417 GATGCTAGTCCTaaaaaaaTTGCCGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTT 400476 ||||| | |||| || || || |||| ||||||| | | |||||| | Sbjct 207751 GATGCATCACATAAACAAGTTTTAGAAAATGTTGAAATTAATAACCTTATAAAAATCCTC 207810 Query 400477 GGACT--TGAACAAGGAAAAGTTTA-------TGATGATCTCAAAGGTTTACGATATGGT 400527 ||| | | | || | || | || ||||||| | ||| ||| |||||||| Sbjct 207811 GGATTACAGTATAAAAAGAAATATAACTCACTTGATGATTTAAAAACATTAAGATATGGT 207870 Query 400528 AGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGGATTAATCATG 400587 | | ||||| | |||||||| ||| || || | ||||||||||| | ||||| Sbjct 207871 AAAGTGATGATAATGGCTGATCAGGATCAAGACGGTTCGCATATCAAAGGTCTGATCATC 207930 Query 400588 AATTTTATCCAT 400599 || || || ||| Sbjct 207931 AACTTCATTCAT 207942 Score = 89.7 bits (98), Expect = 4e-12 Identities = 193/283 (68%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 399178 TATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGATCATAAC 399237 ||| | || ||||| || ||||||||||||||| | | || || || || ||| |||| Sbjct 206497 TATTTTCCAGGTCTGTACAAAATTTATGATGAAATTTTGGTGAACGCTGCTGATAATAAG 206556 Query 399238 AAGAGATGT-CAAACATGTAATATTATCAAAGTTGATATCGATCAAAAAACAGGTCAAAT 399296 |||| | |||| ||| || |||| | | |||| || | ||| | | | ||| Sbjct 206557 CAGAGGGATCCAAAAATG-GATGTTATTAGAATTGACATTAACCAAGAGCAAAATACAAT 206615 Query 399297 TTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAACATAATATATG 399356 || |||| ||||||||| |||||| |||| || |||||||| | || || | Sbjct 206616 ATCAGTTTACAATAATGGTTGTGGTATCCCAGTAGTTATGCATAAAGACGAGAAAATGTT 206675 Query 399357 GGTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATAAAAACGAGGA 399416 || || | |||||||| || | ||||| || || |||||||| || ||||||| Sbjct 206676 TGTTCCGACTATGATTTTCGGTCATCTTTTGACATCATCTAATTAC---AATGACGAGGA 206732 Query 399417 --AAAAACTG-TTGGTGGTAAAAATGGTTTTGGCGCTAAGCTT 399456 | ||| || || |||| ||||| | ||| || |||||| Sbjct 206733 AGAGAAAGTGACAGGCGGTAGGAATGGCTATGGTGCAAAGCTT 206775 >seq303 Length=4096874 Score = 107 bits (118), Expect = 1e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| | || || |||| ||| || |||||||||||||| ||||||||| | || || || Sbjct 1924292 AAAGTAATAGTTGATTTTTCATCACCAAATATTGCTAAGGAAATGCATGTCGGTCACCTA 1924233 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 || ||||| || || ||||| |||||| | | |||| | | || |||||| Sbjct 1924232 AGGTCAACCATCATAGGTGATAGCATTTGTCGAATTCTAGAGTTTTTAAACCATGATGTT 1924173 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 637293 | || | |||||| | ||||| |||||||| ||||| || |||||||||||| || Sbjct 1924172 TTGCGATTGAATCATTTAGGTGACTGGGGAACACAATTTGGAATGTTAATTGCTCAT 1924116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740440202971524