Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq359 102 1e-16 >seq359 Length=3483218 Score = 102 bits (112), Expect = 1e-16 Identities = 119/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 182975 ATATCTATTCTATTA-AACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCA 183033 |||| ||| | |||| || |||| | || |||||||| ||||| || ||||| | Sbjct 2597435 ATATTTATAC-ATTAGAAAAACTAGCTAAAGCAGAAACTCATGATGAACTGTGGAACTCC 2597493 Query 183034 TCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCT 183093 ||||| |||||||| | | ||||| || |||||| ||| | | |||||||||||| Sbjct 2597494 GCACAACTACAGATGGTAAATGAAGGCAAGATGCATGGTTCTATCAGAATGTACTGGGGA 2597553 Query 183094 AAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGC 183131 || ||||| || ||||||||| || |||||||||||| Sbjct 2597554 AAGAAGATTCTAGAATGGACACCAAGTCCGGAAGATGC 2597591 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 183004 GCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAA 183063 || ||||||||||| || |||||| || | ||||| || | ||| ||| |||||| Sbjct 2600452 GCTGAAACACATGAAGACCTGTGGAATTCAGCTCAAATGCAACTTGTGAAAGAGGGAAAA 2600511 Query 183064 ATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCG 183123 |||||| | ||| || || | |||||||| || ||||| || |||||||| || ||| Sbjct 2600512 ATGCATGGCTTTCTAAGACTATACTGGGCAAAGAAGATTCTGGAATGGACGTCAAATCCA 2600571 Query 183124 GAAGATGC 183131 || ||||| Sbjct 2600572 GAGGATGC 2600579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903367452312640