Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20polytes_20[refseq_20GCF_5F000836215.1_202015-02-02] 3,874 sequences; 227,021,014 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq593 138 7e-28 >seq593 Length=2014934 Score = 138 bits (152), Expect = 7e-28 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || ||||| || ||| |||||||| |||||||| || || | ||| || Sbjct 755610 AGACGGAGTACTAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCGGACAATGTGCGT 755669 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | ||||||||||| || || | |||||| ||||| || || | |||||| Sbjct 755670 CCATCTTCCAACTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 755729 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| |||| ||||| | |||||||||| |||||| |||| ||| Sbjct 755730 TTGTCTTGGATC-TTTGCCTTAACATTCTCAATTGTGTCTGAAGGCTCCACCTCCAAGGT 755788 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || || || || || || || ||||||||||||||||| ||| Sbjct 755789 GATGGTCTTGCCTGTCAATGTCTTCACAAAAATCTGCATCTTG 755831 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| | ||| | ||||| || || || ||||||||||| || || ||||| Sbjct 755144 GCCTCCTCTTAAACGAAGAACCAAGTGAAGCGTCGATTCCTTTTGAATATTGTAGTCTGA 755203 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| || | ||||| || || ||||| ||||| || | ||| || || || || || Sbjct 755204 AAGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGG 755263 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | |||||||||| ||||| Sbjct 755264 AATGCCCTCCTTGTCT-TGAATTTTCGCTTTTACATTCTCAATTGTGTCTGATGGCTCCA 755322 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || || || || |||| |||||| |||||||||||||| Sbjct 755323 CCTCCAGTGTGATAGTCTTTCCTGTTAGCGTTTTAACAAAAATCTGCAT 755371 Score = 98.7 bits (108), Expect = 6e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||||||||| | ||| || || ||||| || || || ||||| |||||||| Sbjct 755373 CCTCCTCTAAGACGGAGCACTAAGTGAAGAGTAGATTCTTTCTGGATGTTGTAATCTGAC 755432 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | |||||||| ||||| || ||||| || || | ||| ||||| || || Sbjct 755433 AATGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGA 755492 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658 | || || |||||| ||| ||| | ||||| | ||||||||| ||| || Sbjct 755493 ATGCCTTCTTTGTCTTGGAT-TTTAGCCTTAACATTTTCAATTGTGTCAGATGGCTCAAC 755551 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || || || || || || || || |||||||| Sbjct 755552 CTCTAATGTGATAGTCTTGCCTGTCAAGGTCTTAACGAAGATCTGCAT 755599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314714740238642