Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3133 282 5e-71 seq3117 114 1e-20 seq308 113 5e-20 seq4120 111 2e-19 seq1924 111 2e-19 seq1286 111 2e-19 seq406 109 6e-19 seq5074 107 2e-18 seq5049 107 2e-18 seq2310 107 2e-18 seq3907 105 8e-18 seq393 105 8e-18 seq5178 102 9e-17 seq2605 100 3e-16 seq3128 98.7 1e-15 seq5346 95.1 1e-14 seq2115 95.1 1e-14 seq1358 91.5 2e-13 >seq3133 Length=7630298 Score = 282 bits (312), Expect = 5e-71 Identities = 805/1222 (66%), Gaps = 43/1222 (4%) Strand=Plus/Plus Query 96463 GGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGACAAGGTGCCC 96522 || || || || || |||||||| || ||| | || || || | || || || Sbjct 1021617 GGAGCGTACTTCGTTGAATGGGGTGTCTACCCAAGAAAATTCCCTGTTGATCGTGTACCA 1021676 Query 96523 ATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGCGACGGTATC 96582 ||||| |||||||| ||||| |||||||||||||| || |||||||||||||| || ||| Sbjct 1021677 ATTCCTAATCTGACTCATCTTTTGTACGGTTTTATTCCAATTTGCGGAGGCGATGGCATC 1021736 Query 96583 AACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCGGC 96642 ||||||||| | || | | ||| ||| | ||| | ||| |||||| |||| Sbjct 1021737 AACGACAGTTTGAAGGAAATCGAAGGCAGTTTCCAAGCTCTTCAACGATCATGCAGCGGC 1021796 Query 96643 AGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAAAA 96702 | || |||||||| ||| || ||||| | | |||||| || || || ||||| Sbjct 1021797 CGCGAAGATTTCAAAGTTTCAATTCACGATCCGTGGGCTGCTCTTCAGAAGCCACAAAAG 1021856 Query 96703 GGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTCGC 96762 ||| |||| | ||||| || ||| ||||| ||||| ||||| ||| || || Sbjct 1021857 GGTCTTTCTTCCTGGAATGAGCCATACAAAGGCAACTTTGGTCAGCTGATGTCTCTT--- 1021913 Query 96763 AAACA---TAACCCTCATTTAAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCGAC 96819 ||||| | ||| | | ||||| | ||| ||||||||| ||||| || || Sbjct 1021914 AAACAAGCCAGGCCTGACCTTAAAATCCTACCTTCCATCGGTGGCTGGACTCTTGCAGAT 1021973 Query 96820 CCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCGGTTCGTGAA 96879 || |||| || ||| | ||| | | || || | || ||||| || || || Sbjct 1021974 CCCTTCTTCTTCTTCACAGACAAAGAGAAGAGAGATCGCTTCGTGGATTCTGTGAAAGAT 1022033 Query 96880 TTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCGGA 96939 ||| | || |||||||| ||||| || ||||| ||||| ||||| || || ||||| Sbjct 1022034 TTCCTTCAGACATGGAAGTTCTTCGACGGTGTAGATATCGATTGGGAATTCCCTGGCGGT 1022093 Query 96940 AAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACATATGTAACACTA 96999 ||||| || || || ||| | ||| ||| | ||| ||| | || || | || Sbjct 1022094 AAGGGAGCTAATCCAGACCTTGGCAGTCC---CAAGGACGGAGATGTTTACGTTGAATTA 1022150 Query 97000 TTGAAAGAACTACGCCTAATGCTAGACAAACTGGGTGTGGTGAACAAACGCGT-----GT 97054 |||| ||| | || |||| | || | || | ||| | || || | Sbjct 1022151 ATGAAGGAATTGCGTGAAATGTTGAACGACCT-----TTCCGAAGAGACCGGTAAGAAAT 1022205 Query 97055 ACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTGATAGATTACTCTT 97114 ||||| ||||| || | | || || | ||||| || | || | |||||| | Sbjct 1022206 ACGAGCTGACCTCTGCTATTAGTGCTGGATGGGATAAGATTCAAGTTGTCGATTACAGTG 1022265 Query 97115 CGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAAGGCGCATGGT 97174 |||| | || |||| || | || | ||||||||||||||||||||||| |||| Sbjct 1022266 AGGCTCAGAAGTACATGGACCACATCTTCCTTATGAGTTACGACTTCAAAGGCGCCTGGT 1022325 Query 97175 CCAACACGGAT---TTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAACCCTGACG 97231 | ||| ||| | |||||||| || || | ||||| || | ||||||||| | | Sbjct 1022326 CTAAC---GATACCCTCGGTCATCAGACTCCGCTTTACGCTCCCGCTTGGAACCCTAAGG 1022382 Query 97232 ACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGT--ACCTTCCAA 97289 | | ||||||||||||| || || ||| | |||| ||| || ||| | || Sbjct 1022383 AAACTTACACAACTGACTTTGGTGTGAAATATTTGCTTGCTCAAGGTGTCAACC--CTAA 1022440 Query 97290 CAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGATTACAA 97349 || ||||| || || || || |||||||| | || |||| ||||| ||| ||||| | Sbjct 1022441 GAAGATTGTGGTGGGTGTAGCTATGTACGGACGCGGCTGGACCGGTGTCCACAATTACGA 1022500 Query 97350 GAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAAAACGG 97409 | ||||| || || ||| ||| ||||| || || |||||||| ||| || |||| Sbjct 1022501 AGATAATAATCCCTTCACAGGCAACGCGACAGGACCTGTCAAAGGTACTTGGCAAGACGG 1022560 Query 97410 TGTCGTCGATTATAGGCAAGTTAACGATTTTAAAAACAGTCCCG--CTTACACTTACGCT 97467 ||| || ||||| || || || | | | || | | | | | || | | Sbjct 1022561 TGTAGTTGATTACAGAGAA-ATAGCAAATGAAATCGCTATGGGGAAATGGGAGTT-CCAT 1022618 Query 97468 TACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGAAGAGGCGTTGGATCTG 97527 || || || || ||||| || || ||||| | | | ||| || || || | Sbjct 1022619 TATGATAACGTTGCCGAAGCTCCTTACGTGTTCAGGCCATC----GACTGGT--GACTTA 1022672 Query 97528 ATTTCTTACGACGACACGTCG-TCG-GTATTAGCCAAAGGCGATTACGTGTTACAGAATA 97585 || | ||||| | | ||| ||| |||| | |||||| | || ||| | | |||| Sbjct 1022673 ATAACGTACGA-TAATCCTCGATCGACTATT-GAGAAAGGCAAGTATGTGAGAAACAATA 1022730 Query 97586 ATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGACAATGGCGATTTGTTAAACGCCA 97645 | | || ||||| || || ||||| || ||||| |||||||| || | |||||||||| Sbjct 1022731 AGCTGGGCGGTTTATTCGCGTGGGAGATTGATGCAGACAATGGTGAACTATTAAACGCCA 1022790 Query 97646 TGAACACAGGTCTGGGCAACAG 97667 |||||| ||||| || ||||| Sbjct 1022791 TGAACATGGGTCTCGGAAACAG 1022812 >seq3117 Length=6198915 Score = 114 bits (126), Expect = 1e-20 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 60053 TATGAA-AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111 |||||| ||| |||||| |||| ||||||||||||| ||||||||||||||||||||| Sbjct 2416726 TATGAACAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 2416785 Query 60112 CATACTCACCACTATACTACCGAGGATTGAATATA 60146 ||||| ||||||||||||||||||| | ||||| Sbjct 2416786 GATACTTACCACTATACTACCGAGGACTACATATA 2416820 Score = 113 bits (124), Expect = 5e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 4129827 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 4129768 Query 60125 ATACTACCGAGGATTGA 60141 ||||||||||||||||| Sbjct 4129767 ATACTACCGAGGATTGA 4129751 >seq308 Length=4146151 Score = 113 bits (124), Expect = 5e-20 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2514846 AAAAAGAATCTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2514905 Query 60117 TCACCACTATACTACCGAGGATTGA 60141 | ||||||||||||||||||||||| Sbjct 2514906 TTACCACTATACTACCGAGGATTGA 2514930 >seq4120 Length=16292344 Score = 111 bits (122), Expect = 2e-19 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 9008390 AAAAAGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 9008449 Query 60118 CACCACTATACTACCGAGGATTGAAT 60143 ||||||||||||||||||| | ||| Sbjct 9008450 TACCACTATACTACCGAGGAATTAAT 9008475 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 7561187 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 7561246 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||||||| ||| Sbjct 7561247 GACCACTATACTACCGAAGAT 7561267 Score = 102 bits (112), Expect = 9e-17 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 60051 TTTATGA-AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109 ||| ||| |||| ||||| |||| ||||||||||||| |||||||||||||||||||| Sbjct 7576262 TTTCTGACAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 7576321 Query 60110 GACATACTCACCACTATACTACCGAGGA 60137 | ||||| |||||||||||||||| || Sbjct 7576322 GGGATACTGACCACTATACTACCGAAGA 7576349 >seq1924 Length=7285565 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 612781 AAAAATCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 612840 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||||||||||| Sbjct 612841 TACCACTATACTACCGAGGAT 612861 >seq1286 Length=5526450 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 2600869 AAAAAGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 2600810 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||||||||||| Sbjct 2600809 TACCACTATACTACCGAGGAT 2600789 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 3482466 AAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 3482407 Query 60118 CACCACTATACTACCGAGGAT 60138 |||||||||||||||||||| Sbjct 3482406 TACCACTATACTACCGAGGAT 3482386 Score = 109 bits (120), Expect = 6e-19 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 2598622 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 2598681 Query 60125 ATACTACCGAGGAT--TGAATATA 60146 |||||||||||||| || ||||| Sbjct 2598682 ATACTACCGAGGATGATGTATATA 2598705 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2598920 AAAAAAATACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2598979 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 2598980 TTACCACTATACTACCGAGGAT 2599001 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2599073 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2599132 Query 60117 TCACCACTATACTACCGAGGAT 60138 ||||||||||||||||||||| Sbjct 2599133 GCACCACTATACTACCGAGGAT 2599154 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 2599226 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2599285 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 2599286 TTACCACTATACTACCGAGGAT 2599307 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3359352 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 3359411 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 3359412 ATACTACCGAGGAT 3359425 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 3477911 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 3477852 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||||||||||| Sbjct 3477851 TTACCACTATACTACCGAGGAT 3477830 Score = 105 bits (116), Expect = 8e-18 Identities = 79/92 (86%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| |||| ||||||||||||| |||||||||||||||||||| |||| Sbjct 2598767 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCTGTCTCCCGCGTGACAGGCGGGGATAC 2598826 Query 60117 TCACCACTATACTACCGAGGAT--TGAATATA 60146 | |||||||||||||||||||| || ||||| Sbjct 2598827 TTACCACTATACTACCGAGGATGATGTATATA 2598858 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3483095 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3483036 Query 60126 TACTACCGAGGAT 60138 ||| ||||||||| Sbjct 3483035 TACAACCGAGGAT 3483023 >seq406 Length=2844993 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 214131 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 214190 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 214191 TACTACCGAGGATTG 214205 >seq5074 Length=6409755 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 5245181 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 5245240 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 5245241 ATACTACCGAGGAT 5245254 >seq5049 Length=7158630 Score = 107 bits (118), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 3582124 AAAAAGTTCTCTTCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 3582183 Query 60118 CACCACTATACTACCGAGGA-TTGAA 60142 |||||||||||||||| || ||||| Sbjct 3582184 GACCACTATACTACCGAAGACTTGAA 3582209 Score = 105 bits (116), Expect = 8e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| || |||||||||||||||||| ||||| |||||| Sbjct 4324625 TCTCCCCGGCGGGGAATCGAACCCCGGCCTCCCGCGTGACAGGCGGGGATACTAACCACT 4324566 Query 60125 ATACTACCGAGGATTG 60140 |||||||||||||||| Sbjct 4324565 ATACTACCGAGGATTG 4324550 >seq2310 Length=6428792 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | |||| ||||| || || ||||| |||| || || ||| |||| || Sbjct 5745028 ACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGCCCGTCTTCC 5744969 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 ||||| || || || || || | || ||||||||| | || | || |||||||| | Sbjct 5744968 AGCTGTTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 5744909 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 |||||| ||||| | | | ||||| | |||||| || | |||||||||||| Sbjct 5744908 ATTTTTGCTTTGACATTTTCAATTGTGTCAGAGGGTTCCACTTCTAATGTGATGGTTTTG 5744849 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| |||||||| ||||| Sbjct 5744848 CCAGTCAAGGTCTTGACAAAGATCTGCAT 5744820 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | |||| ||||| || || ||||| |||| || || || |||| || Sbjct 5745256 ACCAAGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCAGACAATGTTCGTCCGTCTTCC 5745197 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || || || || | || ||||||||| | || | || |||||||| | Sbjct 5745196 AGCTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 5745137 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 |||||| ||||| | | | ||||| | |||||| || | |||||||||||| Sbjct 5745136 ATTTTTGCTTTGACATTTTCAATTGTGTCAGAGGGTTCCACTTCTAATGTGATGGTTTTG 5745077 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| |||||||| ||||| Sbjct 5745076 CCAGTCAAGGTCTTGACAAAGATCTGCAT 5745048 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||| ||||| | |||||| || | ||| |||||||| |||||||| || | Sbjct 5745502 CCTCCTCTCAAACGAAGCACCAAGTGTAGTGTCGATTCCTTTTGGATATTGTAGTCCGAA 5745443 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || ||||||||||| || || || || || ||||| || | || Sbjct 5745442 AGTGTGCGACCATCTTCGAGCTGCTTACCCGCAAAGATAAGACGTTGCTGATCTGGGGGA 5745383 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || ||||||| | ||| |||| | ||| | | | | ||||| | ||| || Sbjct 5745382 ATGCCTTCCTTGT-CTTGAATTTTGGCTTTTACATTTTCAATTGTGTCCGAGGGTTCAAC 5745324 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||||||||| || | ||||| ||||| || ||||| Sbjct 5745323 CTCTAATGTGATGGTTTTGCCTGTCAAGGTCTTCACAAAAATCTGCAT 5745276 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||| ||||| || ||||| |||| || || || | Sbjct 5746175 ACGCAGTACCAAGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAGAGTGTACGTCC 5746116 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| || || ||||| || | || ||||||||| | || | | ||||| Sbjct 5746115 ATCCTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATACCTTCCTT 5746056 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || || | || | | ||||| | ||| || || | || || Sbjct 5746055 GTCTTGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGGTTCGACTTCTAAGGTAAT 5745996 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||| || | ||||| |||||||| ||||| Sbjct 5745995 GGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 5745960 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| ||| ||||| || ||||| |||| || || || | Sbjct 5746859 ACGCAGTACCAAGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGAGAGTGTACGTCC 5746800 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| || || ||||| || | || ||||||||| | || | || ||||| Sbjct 5746799 ATCCTCTAGCTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCCTT 5746740 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 || ||| || || | || | | ||||| | ||| || || | || || Sbjct 5746739 ATCTTGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGGTTCGACTTCTAAGGTAAT 5746680 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||||| || | ||||| |||||||| ||||| Sbjct 5746679 GGTTTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 5746644 >seq3907 Length=4173383 Score = 105 bits (116), Expect = 8e-18 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1435600 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1435541 Query 60126 TACTACCGAGGAT-TGAA 60142 ||||||||||||| |||| Sbjct 1435540 TACTACCGAGGATATGAA 1435523 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3637433 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3637492 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 3637493 TACTACCGAGGA 3637504 >seq393 Length=628939 Score = 105 bits (116), Expect = 8e-18 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 331209 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 331268 Query 60126 TACTACCGAGGA-TTGAA 60142 |||||||||||| ||||| Sbjct 331269 TACTACCGAGGACTTGAA 331286 >seq5178 Length=4695126 Score = 102 bits (112), Expect = 9e-17 Identities = 76/88 (86%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 3877152 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 3877211 Query 60118 CACCACTATACTACCGAGGA-TTGAATA 60144 |||||||||||||||| || ||| ||| Sbjct 3877212 TACCACTATACTACCGAAGACTTGTATA 3877239 Score = 100 bits (110), Expect = 3e-16 Identities = 79/92 (86%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 3876476 AAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 3876535 Query 60118 CACCACTATACTACCGAGGA-TTGAAT-ATAT 60147 |||||||||||||||| || ||| || |||| Sbjct 3876536 TACCACTATACTACCGAAGACTTGTATGATAT 3876567 >seq2605 Length=5020101 Score = 100 bits (110), Expect = 3e-16 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| | |||| |||| ||||||| ||||| ||||||||||||||||||||| ||||| Sbjct 384302 AAAAAATCCTCCCCGGCGGGGAATCAAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 384243 Query 60118 CACCACTATACTACCGAGGA 60137 ||||||||||||||||||| Sbjct 384242 GACCACTATACTACCGAGGA 384223 >seq3128 Length=5114887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | ||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 5010445 AAAAAGTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 5010502 Query 60117 TCACCACTATACTACCGAGGA 60137 | |||||||||||||||| || Sbjct 5010503 TGACCACTATACTACCGAAGA 5010523 >seq5346 Length=541963 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||||||| | || |||||||| | ||| || || ||||||||||| ||||| | Sbjct 231463 CCTCCTCTTAATCTTAAAACCAAATGTAGTGTACTTTCTTTTTGAATATTATAATCGGAT 231404 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | ||| || | || |||||||| ||||| |||| ||| ||||| | || Sbjct 231403 AAAGTCCTATTGTCTTCCAATTGTTTACCAGCAAATATAAGTCTCTGTTGGTCTGGAGGG 231344 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | || || || ||| || ||| | || | | || || | ||| || Sbjct 231343 ATTCCTTCTTTATCTTGGATCTTGGCTTTTACATTCTCAATAGTATCAGAAGGTTCTACT 231284 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || |||| ||||||||||| || ||||| Sbjct 231283 TCCAAAGTGATTGTCTTTCCTGTTAATGTCTTTACAAAAATCTGCAT 231237 >seq2115 Length=629047 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||||||| | || |||||||| | ||| || || ||||||||||| ||||| | Sbjct 360781 CCTCCTCTTAATCTTAAAACCAAATGTAGTGTACTTTCTTTTTGAATATTATAATCGGAT 360840 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||||| | ||| || | || |||||||| ||||| |||| ||| ||||| | || Sbjct 360841 AAAGTCCTATTGTCTTCCAATTGTTTACCAGCAAATATAAGTCTCTGTTGGTCTGGAGGG 360900 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | || || || ||| || ||| | || | | || || | ||| || Sbjct 360901 ATTCCTTCTTTATCTTGGATCTTGGCTTTTACATTCTCAATAGTATCAGAAGGTTCTACT 360960 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || || || |||| ||||||||||| || ||||| Sbjct 360961 TCCAAAGTGATTGTCTTTCCTGTTAATGTCTTTACAAAAATCTGCAT 361007 >seq1358 Length=322254 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||||||| | || |||||||| | ||| || || ||||||||||| ||||||| Sbjct 194 CCTCCTCTTAATCTTAAAACCAAATGTAGTGTACTTTCTTTTTGAATATTATAATCAGAT 135 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 | ||||| | ||| || | || |||||||| ||||| |||| ||| ||||| Sbjct 134 AAAGTCCTATTGTCTTCCAATTGTTTACCAGCAAATATAAGTCTCTGTTGGTC 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571777772904160