Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1114 574 4e-159 seq1390 167 2e-36 seq1673 161 9e-35 seq4120 127 2e-24 seq5346 114 1e-20 seq2115 114 1e-20 seq2310 111 1e-19 seq1358 89.7 5e-13 >seq1114 Length=8361563 Score = 574 bits (636), Expect = 4e-159 Identities = 1201/1783 (67%), Gaps = 23/1783 (1%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 |||||| ||||| ||||| || || || ||||| || || |||| | ||| ||||| || Sbjct 3013642 CTTGTCAACTGTGAACTGAATCGCATTAGCGGCAGGCTTTATGCGTAAATAGTACATTCC 3013701 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||| |||| Sbjct 3013702 TGTTTTCAGACCCATTTTCCATGCGTAAAAGTGAATCGAAGTCAATTTTCCATAATTCGG 3013761 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 ||| | | || || || ||||| || || ||||| || |||| ||| || || Sbjct 3013762 TTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTATAAATGCACCTCTATCAGCAGC 3013821 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| || || ||| | || |||||||| || || || || | | || || || Sbjct 3013822 CATTTTAATTGTTGTTTTAACTGAAATTTCCCAAACTGTTTTATATAACTCTCTTATGTC 3013881 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 ||||| || || | || | ||| || |||||||| || || | ||| || || Sbjct 3013882 CTTTGGTATACGCTCAATATTTTGAATGGAACCATTATTGTGAATTATAAGATTCTTCAT 3013941 Query 22405 CGTATCGTTCCACAAA-CCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 || | ||| ||| ||| | | | || ||| | | |||| |||| || || | Sbjct 3013942 GTCTTCATCCCATAAATCCGCCTGTGTT-AAGTCTCGCAATAAATGATGGTTAACAACCT 3014000 Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 | || || || ||||| || || | |||||||||||| |||||||| ||||| || || | Sbjct 3014001 GGAATTCTCCAGACAAAACACGTCTTTGGTAAATGTTTGATGTGAATGGTTCAAAGGACT 3014060 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 |||| ||||| | || || || || || || || ||||| || || || | || |||| Sbjct 3014061 CATTATTTCCTAAGATTTGTGCTGTAGATGCTGTAGGCATTGGAGCTAATAAAAGTGAGT 3014120 Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 | | | || || || | |||||| || | | ||||||||||| ||||| | | Sbjct 3014121 TGCGAAGCCCATGTTTGGCAATTTTTTCTTTTAAAACAGACCAGTCCCATAGATCAGTTG 3014180 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | || || |||||||| || ||||| || | ||| | || | || || ||||| | Sbjct 3014181 GAGTT---TTATCCCACATGTCATATTGTAAGATGCCTTGGCTTGTTGGACTTCCTTCAT 3014237 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763 | || || || | | | || ||||| || || ||||| || || ||||||| Sbjct 3014238 ATGTACTATAAACTCCCTCTTTTTGCGCCAGTTCACAACTGGCCTCTAATGCTCCGTAAT 3014297 Query 22764 ATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATAC 22823 ||||||| |||||||||| | ||| | || || | | ||||| || || || | Sbjct 3014298 ATATAGTTTCGAAGATTTGTTGGTTAAGTTTAATTGCTTCTTCACTTTCATATGGAATGC 3014357 Query 22824 GCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCA 22883 ||| | || || | || || | ||| || || || ||||| || |||| || | || Sbjct 3014358 GCAATAGTACAAATGTATCAGCTAAACCTTGCACTCCAATACCTATAGGTCTGTGTCGCA 3014417 Query 22884 GATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGT 22943 || || ||||| || |||| || || |||| ||| || || | || | || Sbjct 3014418 TGTTAGAGTTCTTTGCTTCAGGCACTGGGTAAAAATTAACATCAATAATTTTATTAAGGT 3014477 Query 22944 TTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA------AACGCCCG 22997 || || | | || || | ||||| ||| | | | Sbjct 3014478 TTTGTGTGATCGTCTTTGTAACTTCTTTCAACTTTGTAAAGTTGTATGTTTTATCTTC-- 3014535 Query 22998 ATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057 |||| |||||| |||| | || || || || | ||| || || || || || ||| Sbjct 3014536 ATTG----ACAAACCTGTTTAATGCAATTGAAGCTAAATTACAAACTGCAACTTCATCTG 3014591 Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117 || |||||||| |||||||| || || | ||| || || || || ||||| | ||| Sbjct 3014592 CTGAAGTGTACTCAACAATTTCTGTGCACAAATTACTGCATTTAATTGTGCCAAGATTTT 3014651 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 | || || ||||||| || || ||||| ||||| |||||||| || ||||| || || | Sbjct 3014652 TTTGATTACTTTTTCTGTTACATGAATCTTTGTACAGCATGTATGGTGTGCCTGTTTCCA 3014711 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCT-GAGCGTGAACACGTCGCACGTACCTG 23236 | || | || || || ||| ||| | | ||| |||| | || | || | || Sbjct 3014712 CTTGTGCTTCTATTATTGCTTTCCATA-ATTCTTGAGCTCGGACTTGCTTAACAAATCTT 3014770 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 ||| | || || |||| ||||| || |||||||| | || |||| || || || Sbjct 3014771 TTTTCCTGTTCATATTTTTCATACAATGCTTCAAATTCTTCTCCCCAACAATCAGCAAGA 3014830 Query 23297 CC-GGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCA 23354 || |||| || ||| |||||||| |||||||||||| || |||||||| || ||| Sbjct 3014831 CCCGGGCAAT--CATGAGGACACATTAGACTCCACATTTCATCTTTTTCAACCCGCTTCA 3014888 Query 23355 TAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGC 23414 |||| | ||| || ||||||| || || || | ||| | || | ||||| ||||||| Sbjct 3014889 TAAATAAATCTGGGATCCATAAGGCATAAAATAATTCTCTTGCTCTGACCTCTTCTTTGC 3014948 Query 23415 CGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAA 23474 | || |||||||||| ||| ||||| || || || || | ||||| || || ||||||| Sbjct 3014949 CAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAGTGCCAAGGTTCAAGGTAAA 3015008 Query 23475 CGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGT 23534 || || || || |||| || ||||| || || || || || | ||| || || |||| Sbjct 3015009 TAGCGAATGCTCCTGGTCGTTTGTTGCCTCCTTGGTCAACATACCTGGCTGTATTATTGT 3015068 Query 23535 ACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAAC 23594 ||||||| | ||| ||||| || || ||||| | || || || | | | || Sbjct 3015069 ACACTCTCAACATTGGCACAAGGCCATTGGAAACACCATTAGTACCTGCTATATATGTAC 3015128 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 ||||||| | | | || || || | ||||| || || | ||||| || || | | Sbjct 3015129 CTTTTGCCCTGATGCAATGTACATGAAGTCCTATACCACCAGCAGATTTGGAGATTAGGG 3015188 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | |||||||| || ||||| || || ||||| |||||||| ||||| | || | | || Sbjct 3015189 CACATTGTTTTAGTGTGTCATATATACCCTCAATGCTGTCATCTTTCATAGCTATGAGGA 3015248 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || ||||| | ||| | | | || || ||||| || |||| ||| || ||||| || | Sbjct 3015249 AGCAAGAAGATAATTGTGGTCTTGGAGTTGCGGCGGAAAACAATGTGGGACTGGCATGAG 3015308 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | || ||| | |||| | |||||| || || || || ||||||||||| || || | Sbjct 3015309 TGAAATATTTTTCAGACAACAAATTGTAAGTTTCAATAGCTGCATCAATGTCTTCACCAT 3015368 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 | || || || | ||| | ||||| ||| | || ||||| || Sbjct 3015369 GGATTCCAATTGAGACTCTCATCAGCATATGCTGGGGTCTTTC 3015411 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| || || || || ||||| || || | || |||||| | || Sbjct 2710295 ATGCAGATCTTCGTAAAAACCCTTACGGGTAAAACCATAACGTTAGAGGTTGAAGCCTCT 2710354 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||||| || ||| || ||| ||||| || ||| | || || || ||| Sbjct 2710355 GACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAG 2710414 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | | || ||||| ||||||||||||||||| | | | || || ||| || || Sbjct 2710415 CAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGA-TGGACGTACATTGTCCGACTACAA 2710473 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || |||||||| ||||| |||| Sbjct 2710474 CATCCAGAAGGAATCGACACTTCACTTGGT 2710503 >seq1390 Length=76047 Score = 167 bits (184), Expect = 2e-36 Identities = 366/542 (68%), Gaps = 10/542 (2%) Strand=Plus/Plus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| || | || || ||| |||||| || || ||||| ||||||||| | || ||| Sbjct 54214 AGATTAGTGCTTTTCCCTATTAAATATCACGATATCTGGAAGATGTACAAACAAGCCGAA 54273 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || |||||||||| |||||||| || || || ||| | |||||| | || Sbjct 54274 TGTTCTTTTTGGACCGCTGAAGAAGTTGATCTTTCAGCCGATTTATATGATTGGAACTCT 54333 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | | | ||| ||| | ||| || ||| | | || |||||||| || || ||| Sbjct 54334 TTAACACCAGATGAAAGATACTTTGTTTCACATATTCTTGCATTTTTCGCTGCTTCTGAT 54393 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTG--CAAGTGACGGAGG 57774 |||||||| || |||| | || ||||| ||||| | ||||| || | | |||| Sbjct 54394 GGTATTGTAAATATGAATCTTGTTGAAAGGTTTTCCGAGGAAGTCACCATTTTA--GAGG 54451 Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834 | | ||| ||||| ||||| || || | || ||||| | ||||| ||||||||||| Sbjct 54452 CAAAATGTTTTTATGGATTCCAGGTAGTTATCGAAAATATCCATTCTGAAATGTATTCTT 54511 Query 57835 TACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCG 57894 |||| || |||||||| | | || ||||| ||| | || | || || || Sbjct 54512 TACTTATAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAA 54571 Query 57895 AAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCA 57954 | ||||| || | || |||||||| || ||| || | |||||||||||| | | Sbjct 54572 ACACAATACCATCTATTAAAAAGAAGGCTGATTGGGCATTGAAATGGATAAAAGACAAAA 54631 Query 57955 CGGCCACGTTCGC--CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 | || || || | |||| | ||||| || || |||||||| || ||| ||| Sbjct 54632 AATCTACTTTTGCTACCAGAG--TTATCGCATTTGCTTGTGTCGAAGGAATTTTC-TTTA 54688 Query 58013 GGGCAGC-TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 | | ||| ||||| | || || ||| | |||||| | || || ||||| || || ||| Sbjct 54689 GTGGAGCATTTGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGT 54748 Query 58072 TT 58073 || Sbjct 54749 TT 54750 >seq1673 Length=160240 Score = 161 bits (178), Expect = 9e-35 Identities = 567/873 (65%), Gaps = 28/873 (3%) Strand=Plus/Minus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| || | || || ||| |||||| || || ||||| ||||||||| | || ||| Sbjct 45572 AGATTAGTGCTTTTCCCTATTAAATATCACGATATCTGGAAGATGTACAAACAAGCCGAA 45513 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || |||||||||| |||||||| || || || ||| | |||||| |||| Sbjct 45512 TGTTCTTTTTGGACCGCTGAAGAAGTTGATCTTTCAGCCGATTTATATGATTGGAATTCT 45453 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | | | ||| ||| | ||| || ||| | | || |||||||| || || ||| Sbjct 45452 TTAACACCAGATGAAAGATACTTTGTTTCACATATTCTTGCATTTTTCGCTGCTTCTGAT 45393 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGT--GCAAGTGACGGAGG 57774 |||||||| || |||| | || ||||| ||||| | ||||| || | | |||| Sbjct 45392 GGTATTGTAAATATGAATCTTGTTGAAAGGTTTTCCGAGGAAGTCACCATTTTA--GAGG 45335 Query 57775 CGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGC 57834 | | ||| ||||| ||||| || || | || ||||| | ||||| ||||||||||| Sbjct 45334 CAAAATGTTTTTATGGATTCCAGGTAGTTATCGAAAATATCCATTCTGAAATGTATTCTT 45275 Query 57835 TACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCG 57894 |||| || |||||||| | | || ||||| ||| | || | || || || Sbjct 45274 TACTTATAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAA 45215 Query 57895 AAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCA 57954 | ||||| || | || |||||||| || ||| | | |||||||| ||| | Sbjct 45214 ACACAATACCATCTATTAAAAAGAAGGCTGATTGGGCTTTGAAATGGATTAAAGATAAAA 45155 Query 57955 CGGCCACGTTCGC--CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTC 58012 | || || || | |||| | ||||| || || || ||||| || ||| ||| Sbjct 45154 AATCTACTTTTGCTACCAGAG--TTATCGCATTTGCTTGTGTTGAAGGAATTTTC-TTTA 45098 Query 58013 GGGCAGC-TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071 | | ||| ||||| | || || ||| | |||||| | || || ||||| || || ||| Sbjct 45097 GTGGAGCATTTGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGT 45038 Query 58072 TTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT 58131 || || || | || || || || ||||| ||| || ||||| || | | Sbjct 45037 TTTCAAATGAACTTATTAGCCGAGATGAAGGTCTGCATTGCGAGTTTGCTTGTTTGTTAA 44978 Query 58132 ACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGG 58191 | | | || |||||||| | ||| ||| ||| || | ||||| | Sbjct 44977 ATAGTTATCTTATCAATAAA------TGCGATAAGATCAAGGATATCGTTGTTGAGGCAG 44924 Query 58192 TCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA-- 58249 | |||||| | || ||| | | ||| |||| || | | || ||||| Sbjct 44923 TAAAAATCGAACAAGAATTTTTAAGTGAAAGTTTACCAGTTAATCTTATTGGAATGAATT 44864 Query 58250 -CAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGA 58308 ||| | || |||| || || ||||| ||||| ||||||||| | ||| | ||| Sbjct 44863 GCAA--ACTT-ATGTGCAATTATATTGAATTTGTAGCCGACAGATTATTGAT-AAAC--C 44810 Query 58309 TTGGAGAGCGTCA---TTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGC 58365 ||||||| | | ||||||||| ||||| || ||||||||| | || || | Sbjct 44809 TTGGAGAAGATAAGATTTACAACACAGCCAATCCTTTCGATTTTATGGAAAATATTTCAC 44750 Query 58366 TCGAGGGCAAGACAAACTTTTTCGaaaaaaaaG 58398 | | || || |||||||| ||||| ||||||| Sbjct 44749 TTGTTGGTAAAACAAACTTCTTCGACAAAAAAG 44717 >seq4120 Length=16292344 Score = 127 bits (140), Expect = 2e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 57660 AAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGT 57719 || || | |||||| | ||||||||||| || ||||| ||||| || || || |||||| Sbjct 7436604 AAGGATTGTGAGAGGCACTTTATTAAACATGTTTTGGCATTTTTTGCTGCTTCTGATGGT 7436545 Query 57720 ATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGA 57779 || ||||| |||||| | || || |||||||||||||||| ||| | || || || Sbjct 7436544 ATAGTTAATGAGAATCTAGTAGAGCGATTTTCACAAGAAGTTCAAATTGGTGAAGCAAGG 7436485 Query 57780 TGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTC 57839 | |||||| ||||| ||| | || || || || || || || || ||||| || | || Sbjct 7436484 TTCTTTTATGGATTCCAAATTGCTATGGAGAATGTACACTCTGAGATGTACTCCTTGCTG 7436425 Query 57840 ATCGATACGTACGTGAAGGA 57859 || ||||| ||| | | ||| Sbjct 7436424 ATTGATACTTACATTAGGGA 7436405 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||||||||| ||| || | ||||||| ||| || || | || | || ||| Sbjct 7436193 AAGAAGGCAGACTGGGCACTGCAATGGATCGCCAGCAAGACAGCAAACTTTGGTGAAAGG 7436134 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || | || || || || || || || || |||||||| || ||||||||| ||||||| Sbjct 7436133 ATAGTTGCCTTTGCTGCTGTGGAGGGCATCTTCTTTTCTGGAAGCTTTGCGTCAATATTC 7436074 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| ||||||| || ||| | ||||| || ||||| || ||||| ||| |||| || | Sbjct 7436073 TGGTTGAAGAAGCGTGGCTTAATGCCTGGTCTGACCTTCAGCAATGAGCTGATTTCTAGG 7436014 Query 58095 GACGAGG 58101 || |||| Sbjct 7436013 GATGAGG 7436007 Score = 98.7 bits (108), Expect = 9e-16 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 57510 GAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGAC 57569 |||||||| |||| ||| ||||| || |||| ||||| || || || ||||||| || Sbjct 7436858 GAACCACTCTTGCGAGAAAATCCGCGCCGATTCGTCATCTTCCCCATCCAATATCCTGAT 7436799 Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||||||||| ||||| || || ||||| || || ||||| || | Sbjct 7436798 ATCTGGCAAATGTACAAAAAGGCTGAAGCTTCATTCTGGACTGTAGAGGAAGTTGATTTA 7436739 Query 57630 TCTAAGG 57636 || |||| Sbjct 7436738 TCCAAGG 7436732 Score = 93.3 bits (102), Expect = 4e-14 Identities = 115/156 (74%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 58323 TACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAAC 58382 |||||||| || ||||| ||||| || ||||||||||| || | ||||||||||||||| Sbjct 7434772 TACAACACAAAGAATCCATTTGACTTCATGAATCTGATATCATTAGAGGGCAAGACAAAC 7434713 Query 58383 TTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAGTTG 58442 || || || || ||||| | || || ||||| | || |||||| | |||| | | Sbjct 7434712 TTCTTTGAGAAGAAAGTGGGAGAGTACCAAAAGTGGGGGGTGATGTCC---AACAGGAT- 7434657 Query 58443 GAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478 ||| || | ||||| || ||||| | |||||| Sbjct 7434656 --GGATAATGTATTCACATTAGATGCGGAGTTTTAA 7434623 >seq5346 Length=541963 Score = 114 bits (126), Expect = 1e-20 Identities = 167/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| |||||||| | ||||| || || ||||| | || || ||||| || Sbjct 231236 CATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTC 231295 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || ||| | || || || ||||| | || || ||||| Sbjct 231296 TGATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCA 231355 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || ||||| ||||| ||||| ||||||||| || |||| | ||||||||| Sbjct 231356 ACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAA 231415 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT-AGAAG 31425 |||||||||||| || || ||| |||| | ||| | || || ||| ||||| Sbjct 231416 TATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGTAAGAAG 231470 >seq2115 Length=629047 Score = 114 bits (126), Expect = 1e-20 Identities = 167/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| |||||||| | ||||| || || ||||| | || || ||||| || Sbjct 361008 CATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTC 360949 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || ||| | || || || ||||| | || || ||||| Sbjct 360948 TGATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCA 360889 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | || ||||| ||||| ||||| ||||||||| || |||| | ||||||||| Sbjct 360888 ACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAA 360829 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT-AGAAG 31425 |||||||||||| || || ||| |||| | ||| | || || ||| ||||| Sbjct 360828 TATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGTAAGAAG 360774 >seq2310 Length=6428792 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| |||||||| ||||| | || || ||||| || Sbjct 5744820 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5744879 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| |||||| | ||| |||||||||||| | || || |||||| Sbjct 5744880 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5744939 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || ||||||||| |||||||| || || || || ||| Sbjct 5744940 CAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGACGGGCGAACATTGTCTGACTACAAC 5744999 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || ||||| ||||||| | ||| | || |||| Sbjct 5745000 ATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGGTA 5745048 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || |||||| | || || ||||| || Sbjct 5746416 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTGGAACCCTCA 5746475 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | ||| ||||||||||| | || || |||||| Sbjct 5746476 GACACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAAGGTATCCCTCCAGACCAG 5746535 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| ||||||||| | ||||| | || | |||||| ||| Sbjct 5746536 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTACAAC 5746595 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || ||||| || || || ||||||| | ||| | || |||| Sbjct 5746596 ATTCAGAAGGAATCCACACTCCACTTGGTACTACGTCTGCGAGGTGGTA 5746644 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| |||||||| ||||| | || || ||||| || Sbjct 5745048 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5745107 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| |||||| | ||| |||||||||||| | || || |||||| Sbjct 5745108 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5745167 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || || ||||| ||| |||||||| || || || || ||| Sbjct 5745168 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGACGGACGAACATTGTCTGACTACAAC 5745227 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || ||||| ||||||| | ||| | || |||| Sbjct 5745228 ATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGGTA 5745276 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| | ||||| || || |||||| |||| || ||||| || Sbjct 5745732 ATGCAGATCTTTGTGAAGACCTTAACAGGAAAGACCATCACCCTCGAGGTGGAACCCTCT 5745791 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||||||||| | || || |||||| Sbjct 5745792 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5745851 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| ||||||||| | ||||| | || | |||||| ||| Sbjct 5745852 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTACAAC 5745911 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| || || || ||||||| Sbjct 5745912 ATTCAGAAGGAATCCACACTCCACTTGGTACT 5745943 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| ||||||||||||| ||||| | || |||||||| || Sbjct 5745276 ATGCAGATTTTTGTGAAGACCTTGACAGGCAAAACCATCACATTAGAGGTTGAACCCTCG 5745335 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||||||||| | || || || ||| Sbjct 5745336 GACACAATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 5745395 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || || || ||| | ||||| | || | || || || Sbjct 5745396 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCGGACTACAAT 5745455 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| |||||||| || || |||| ||| | |||| || || Sbjct 5745456 ATCCAAAAGGAATCGACACTACACTTGGTGCTTCGTTTGAGAGGAGG 5745502 Score = 104 bits (114), Expect = 2e-17 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| | || || || || ||||| |||| || ||||| ||| Sbjct 5746872 ATGCAGATCTTCGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746931 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||||||||| | || || |||||| Sbjct 5746932 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746991 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA---CTCTATGACTATGAGCGATTAT 31369 || ||||| || ||||| |||||||||||||| || | || ||| | || || Sbjct 5746992 CAACGTCTCATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTA-CACTCT--CGGACTAC 5747048 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || || || ||||| |||||||| | || | || |||| Sbjct 5747049 AACATCCAAAAGGAGTCCACACTTCACTTGGTACTTCGCCTCCGTGGTGGTA 5747100 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||||||||| || |||||| | || || || || || Sbjct 5747100 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 5747159 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | ||| ||||||||||| | || || |||||| Sbjct 5747160 GACACCATCGAGAATGTTAAAGCCAAAATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5747219 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| || ||||| |||||||||||||| || Sbjct 5747220 CAACGTCTTATCTTCGCCGGCAAACAGTTGGAGGA 5747254 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| | || || || || ||||| |||| || ||||| ||| Sbjct 5746188 ATGCAGATCTTTGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746247 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| | || ||||||||||| | || || |||||| Sbjct 5746248 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746307 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| ||||||||| | ||||| | || | ||||||||| Sbjct 5746308 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTATAAT 5746367 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || |||||||| || || || || |||| Sbjct 5746368 ATCCAAAAAGAGTCCACCCTCCACTTGGT 5746396 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||||||||| || ||||| |||| ||||| || ||||| | || |||||||| || Sbjct 5745503 CATGCAAATTTTTGTTAAGACCTTGACTGGCAAGACCATCACATTGGAGGTTGAACCTTC 5745562 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | || | || ||| | || || |||||||| | || || ||||| Sbjct 5745563 AGATACCATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATCCCCCCAGACCA 5745622 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| ||||| || || || || ||||||||||| || | | | || | ||||| | Sbjct 5745623 GCAACGTCTCATCTTTGCCGGTAAACAGTTGGAGGA-TGGACGTACACTCTCTGATTACA 5745681 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||||||| || ||||| || || || ||||| Sbjct 5745682 ACATTCAGAAGGAATCCACACTCCACTTGGTA 5745713 >seq1358 Length=322254 Score = 89.7 bits (98), Expect = 5e-13 Identities = 105/141 (74%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 31286 GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAA 31345 || |||||||| | || || ||||| ||| | || ||||| ||||| ||||| |||||| Sbjct 61 GATAAGGAAGGAATCCCTCCAGACCAACAGAGACTTATATTTGCTGGTAAACAATTGGAA 120 Query 31346 GACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || |||| | |||||||| |||||||||||| || || ||| |||| | Sbjct 121 GACAATAGGACTTTATCTGATTATAATATTCAAAAAGAAAGTACACTACATTTGGTTTTA 180 Query 31406 AGACTGAGGGGCGGT-AGAAG 31425 ||| | || || ||| ||||| Sbjct 181 AGATTAAGAGGAGGTAAGAAG 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445735352370240