Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1114 105 4e-18 >seq1114 Length=8361563 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| | || ||||||||| || | |||||| || || || || ||||| || || Sbjct 2710522 ACCTCCTCGAAGCCTCAACACCAAGTGAAGTGTCGATTCCTTCTGGATGTTGTAGTCGGA 2710463 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || || ||||| || || || || || || | |||||| || | || Sbjct 2710462 CAATGTACGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAATCTTTGCTGATCTGGTGG 2710403 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 ||||| ||||| || ||| | |||||| ||| || ||||| || || ||| Sbjct 2710402 AATGCCCTCTTTGTCTTGAATTTTCGCTTTTACATTTTCGATAGTGTCAGAGGCTTCAAC 2710343 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || | ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 2710342 CTCTAACGTTATGGTTTTACCCGTAAGGGTTTTTACGAAGATCTGCAT 2710295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318755952211656