Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2996 152 8e-33 >seq2996 Length=503 Score = 152 bits (168), Expect = 8e-33 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | ||||| ||||||||||| || || || ||||| || || Sbjct 390 GCGAAGCGTCACAGAAAAGTACTTCGTGATAACATCCAGGGTATTACGAAGCCCGCCATT 331 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || || | || || || |||||| |||| || ||| | || || |||| | Sbjct 330 CGACGTCTCGCACGAAGAGGCGGCGTGAAGCGTATCTCCGGTTTGATATACGAGGAGACT 271 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| || || | |||||| ||| ||| |||| || || || ||| |||||| Sbjct 270 CGCGGTGTATTAAAAGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACCTACACCGAG 211 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| | ||||| |||| || || ||||||||||||| Sbjct 210 CACGCAAAGAGGAAGACCGTCACCGCGATGGACGTCGTTTACGCCCTGAAACGTCAAGGA 151 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || ||||| || ||||| Sbjct 150 CGTACCCTGTACGGTTTCGGCGGTTAA 124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79070105481396