Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3133 295 6e-75 seq5346 138 1e-27 seq2115 138 1e-27 seq1114 129 5e-25 seq2310 127 2e-24 seq4120 123 2e-23 seq1358 104 2e-17 >seq3133 Length=7630298 Score = 295 bits (326), Expect = 6e-75 Identities = 664/990 (67%), Gaps = 17/990 (2%) Strand=Plus/Minus Query 57178 ATTTCGCTTGCAATTTGCTTGTAATCAACCACGCCTTCCTCCCACGTGCCGTGCACAGGC 57237 ||||| |||| |||| |||||||||| || || || | ||| || || | ||||| Sbjct 1022593 ATTTCATTTGCTATTTCTCTGTAATCAACTACACCGTCTTGCCAAGTACCTTTGACAGGT 1022534 Query 57238 CCACTTCCTTTACCCGTGAACGGATTGTTGTCCGTGTAGTCGTGCACACCCGTCCATCCT 57297 || | | || || ||||| ||||| || || ||| | ||| ||||| ||||| || Sbjct 1022533 CCTGTCGCGTTGCCTGTGAAGGGATTATTATCTTCGTAATTGTGGACACCGGTCCAGCCG 1022474 Query 57298 CGACCGTACATGGCCACGCCAACCACTATTTTGTCAGCG--GACACGTTCTGCGCTAACA 57355 || |||||||| || || || ||||| || || | || | ||||| || | || | || Sbjct 1022473 CGTCCGTACATAGCTACACCCACCACAATCTTCTTAGGGTTGACACCTT--GAGCAAGCA 1022416 Query 57356 AAGTGCGTACAGCATTGTCTGTGGTATATGGTTCGCTAGGGTTCCACAGAGGCGCATAAA 57415 || ||| || ||| || || || | ||| |||||||||| || || |||| Sbjct 1022415 AATATTTCACACCAAAGTCAGTTGTGTAAGTTTCCTTAGGGTTCCAAGCGGGAGCGTAAA 1022356 Query 57416 TGTTGGTTTGATAGCCCAAATTTGTGTTACTCCAGGCACCTTTAAAATCGTACGACATTA 57475 || |||| || | | |||| |||||| ||||| || ||||| ||| | Sbjct 1022355 GCGGAGTCTGATGACCGAGGGTATCGTTAGACCAGGCGCCTTTGAAGTCGTAACTCATAA 1022296 Query 57476 AGAATATGCTGTCGAGATATTTTTGCGCATGATTGTAATCGACAAGTTCGATTTTATCAT 57535 ||| ||| ||| | || || || || | | |||||||||||| || || ||||| Sbjct 1022295 GGAAGATGTGGTCCATGTACTTCTGAGCCTCACTGTAATCGACAACTTGAATCTTATCCC 1022236 Query 57536 TACCGGCGCCGATGGCTGTTGTGAGCAATAGTTTACGATCAGTTTCCAGTTCCAAC---T 57592 || || | || || | || ||| ||| | | || || ||| | | Sbjct 1022235 ATCCAGCACTAATAGCAGAGGTCAGCTCGTATTTCTTACCGGTCTC---TTCGGAAAGGT 1022179 Query 57593 CGTCCAACATTAATCTCAAATCTTTCAATAGCCGCACGTATGTTTCTCCGTCGCGACCAG 57652 ||| ||||||| | ||| || |||| || ||||| |||||||| | | Sbjct 1022178 CGTTCAACATTTCACGCAATTCCTTCATTAATTCAACGTAAACATCTCCGTC----CTTG 1022123 Query 57653 GGTCGCCCAACAAA-GGATTAGCACCATTACCACCAGGAAATTCCCAATCAATGTCGACT 57711 || | |||| |||||||| || ||||| ||||| ||||||||||| || || || Sbjct 1022122 GGACTGCCAAGGTCTGGATTAGCTCCCTTACCGCCAGGGAATTCCCAATCGATATCTACA 1022063 Query 57712 CCATCAAAAAATTTCCACACTTTGATGTAGTCGCGCACCGATTGCACAAAAGTGTTGCGA 57771 || || || || ||||| | | | | || ||| || | ||| || | | Sbjct 1022062 CCGTCGAAGAACTTCCATGTCTGAAGGAAATCTTTCACAGAATCCACGAAGCGATCTCTC 1022003 Query 57772 ATAGTGTCGTC-GTGCATGAAAAAGAAGGGATCCGATAAGGTCCAACCACCAATGGATGG 57830 | | ||| ||| | ||| ||||||||||| | | ||||| ||||| ||||| || Sbjct 1022002 TTCTCTTTGTCTGTGAA-GAAGAAGAAGGGATCTGCAAGAGTCCAGCCACCGATGGAAGG 1021944 Query 57831 CAATACTTTTAGATGCGGATATGCTTTTTTGACCGCCATCAGTTGACCAAAATTACCTTT 57890 | | ||| || | || |||| ||| | | |||||| |||||||| || ||||| Sbjct 1021943 TAGGATTTTAAGGTCAGGCCTGGCTTGTTTAAGAGACATCAGCTGACCAAAGTTGCCTTT 1021884 Query 57891 GTAAGGTTCGTTCCAAGCCGATACTCCTTGTTGAGGCTTTTGTAGCGCCGCCCAAGGATC 57950 ||| || || ||||| | || | || | ||| ||||| || || || ||||| ||||| Sbjct 1021883 GTATGGCTCATTCCAGGAAGAAAGACCCTTTTGTGGCTTCTGAAGAGCAGCCCACGGATC 1021824 Query 57951 GTGTATCGTTACTTTGAAATCTTCTCGGCCTGCACACGAACGTTGCAACGCTTCAAAACT 58010 ||| || | |||||||||||||| ||||| || || ||||| | |||| ||||| Sbjct 1021823 GTGAATTGAAACTTTGAAATCTTCGCGGCCGCTGCATGATCGTTGAAGAGCTTGGAAACT 1021764 Query 58011 ACCTGTAATCGTCTTTAGACTGTCGTTGATGCCATCGCCTCCGCAAATAGGCACGAAACC 58070 ||| || ||| | |||||||||||||||||||||||||||||| || | ||||| Sbjct 1021763 GCCTTCGATTTCCTTCAAACTGTCGTTGATGCCATCGCCTCCGCAAATTGGAATAAAACC 1021704 Query 58071 GTACAACAAATGAGTCAAATTGGGTACGGGTACTTTATCAACTGGATATTTACGACCGTA 58130 |||||| | |||||||| ||| || | ||||| |||||| || |||| | ||| Sbjct 1021703 GTACAAAAGATGAGTCAGATTAGGAATTGGTACACGATCAACAGGGAATTTTCTTGGGTA 1021644 Query 58131 CACACTCCACTCCACGAAATAAGCTCCCAC 58160 |||| ||| || ||||| || ||||| || Sbjct 1021643 GACACCCCATTCAACGAAGTACGCTCCGAC 1021614 >seq5346 Length=541963 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| || || || || | ||||| | ||||| || | ||| Sbjct 231237 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 231296 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||| | || |||| || | || || |||||||| || || || ||| Sbjct 231297 GATACTATTGAG--AATGTAAAAGCCAAGATCCAA-GATAAAGAAGGAATCCCTCCAGAC 231353 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | |||| ||||| || |||||||| ||||| || | ||| | |||||| Sbjct 231354 CAACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTAT 231413 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||||||||||||| || |||||||| || |||| |||||||||| || Sbjct 231414 AATATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGTAA 231466 >seq2115 Length=629047 Score = 138 bits (152), Expect = 1e-27 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| || || || || | ||||| | ||||| || | ||| Sbjct 361007 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 360948 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| ||| | || |||| || | || || |||||||| || || || ||| Sbjct 360947 GATACTATTGAG--AATGTAAAAGCCAAGATCCAA-GATAAAGAAGGAATCCCTCCAGAC 360891 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | |||| ||||| || |||||||| ||||| || | ||| | |||||| Sbjct 360890 CAACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTAT 360831 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||||||||||||| || |||||||| || |||| |||||||||| || Sbjct 360830 AATATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGTAA 360778 >seq1114 Length=8361563 Score = 129 bits (142), Expect = 5e-25 Identities = 173/238 (73%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||||||||| || || ||||| || | || |||||| |||| || | || || || | Sbjct 2710291 AACAATGCAGATCTTCGTAAAAACCCTTACGGGTAAAACCATAACGTTAGAGGTTGAAGC 2710350 Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 |||||||||||||| | || |||| |||| ||| |||||||| || |||||||| Sbjct 2710351 CTCTGACACTATCGAA--AATGTAAAAGCGAAAATTCAA-GACAAAGAGGGCATTCCACC 2710407 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || || || | | || || ||||||||||| || ||||||| || || || ||| Sbjct 2710408 AGATCAGCAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGTACATTGTCCGA 2710467 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAAT 25229 ||||| || || || ||||| || || || || ||| | ||||| ||||||| ||| Sbjct 2710468 CTACAACATCCAGAAGGAATCGACACTTCACTTGGTGTTGAGGCTTCGAGGAGGTAAT 2710525 >seq2310 Length=6428792 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| || || || || ||||||| |||| ||||| | || Sbjct 5745731 AATGCAGATCTTTGTGAAGACCTTAACAGGAAAGACCATCACCCTCGAGGTGGAACCCTC 5745790 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| |||||| | || |||| || | || ||||| ||||| || || || || Sbjct 5745791 TGACACCATCGAG--AATGTTAAAGCCAAGATCCAA-GACAAGGAAGGTATCCCCCCAGA 5745847 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| || || | || || ||||||||||| ||||||||| ||| || | |||||| Sbjct 5745848 CCAGCAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTA 5745907 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 ||| ||||| || |||||||| || || || || ||| Sbjct 5745908 CAACATTCAGAAGGAATCCACACTCCACTTGGTACTA 5745944 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| || || || || ||||||| |||||||||| | || Sbjct 5746188 ATGCAGATCTTTGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746247 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| || | || ||||| ||||| || || || ||| Sbjct 5746248 GACACCATCGAG--AATGTTAAAGCCAAGATCCAA-GACAAGGAAGGTATCCCCCCAGAC 5746304 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || ||||||||||| ||||||||| ||| || | |||||| Sbjct 5746305 CAGCAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTAT 5746364 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| |||||||| ||||| || || || ||| || | || |||| || Sbjct 5746365 AATATCCAAAAAGAGTCCACCCTCCACTTGGTGTTACGTCTGCGAGGTGG 5746414 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || ||||||| | || ||||| | || Sbjct 5746416 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTGGAACCCTCA 5746475 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| ||| ||||| ||||| || || || ||| Sbjct 5746476 GACACCATTGAG--AATGTTAAAGCCAAAATTCAA-GACAAGGAAGGTATCCCTCCAGAC 5746532 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || ||||||||||| ||||||||| ||| || | ||||||| Sbjct 5746533 CAGCAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTAC 5746592 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || |||||||| || || || || ||| | || |||| || Sbjct 5746593 AACATTCAGAAGGAATCCACACTCCACTTGGTACTACGTCTGCGAGGTGG 5746642 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| |||||||| | |||||||| | ||| Sbjct 5744820 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5744879 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| ||||||||| || ||||| ||||| || || || || Sbjct 5744880 GACACAATTGAAAATGTCA---AAGCAAAAATCCAA-GACAAGGAAGGCATCCCCCCAGA 5744935 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || |||||||||||||| | ||||| | || || || || || Sbjct 5744936 CCAGCAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGACGGGCGAACATTGTCTGACTA 5744995 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || |||||||| || || || || || Sbjct 5744996 CAACATCCAGAAGGAATCCACACTTCACTTGGTACT 5745031 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| |||||||| | |||||||| | ||| Sbjct 5745048 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5745107 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| ||||||||| || ||||| ||||| || || || || Sbjct 5745108 GACACAATTGAAAATGTCA---AAGCAAAAATCCAA-GACAAGGAAGGCATCCCCCCAGA 5745163 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||| | | || ||||||||||| || | ||||| | || || || || || Sbjct 5745164 CCAGCAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGACGGACGAACATTGTCTGACTA 5745223 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || |||||||| || || || || || Sbjct 5745224 CAACATCCAGAAGGAATCCACACTTCACTTGGTACT 5745259 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || ||||||| | || |||||| | || Sbjct 5744592 ATGCAGATTTTTGTGAAGACCTTGACGGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 5744651 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| |||||||| || || || || ||||| Sbjct 5744652 GACACAATTGAAAATGTTAAGGCCAAGATTCAA-GACAAAGAGGGCATCCCCCCAGACCA 5744710 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | || |||||||||||||| | ||||||| ||||| || || ||||| Sbjct 5744711 GCAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACATTGTCTGACTACAA 5744770 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || || || || || Sbjct 5744771 CATCCAGAAGGAATCCACACTTCACTTGGTACT 5744803 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| |||| || | ||||| || | ||| Sbjct 5745960 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746019 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| ||||| || || || ||||| Sbjct 5746020 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746079 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || || ||||||||||| |||| |||| || || | || ||||| Sbjct 5746080 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGATGGACGTACACTCTCTGACTACAAC 5746139 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| ||||| || || || || || Sbjct 5746140 ATCCAAAAAGAGTCCACCCTCCACTTGGTACT 5746171 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| |||| || | ||||| || | ||| Sbjct 5746644 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746703 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| || || ||||| || || || ||||| Sbjct 5746704 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGATAAGGAAGGCATCCCCCCAGACCAG 5746763 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || || ||||||||||| |||| |||| || || | || ||||| Sbjct 5746764 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGATGGACGTACACTCTCTGACTACAAC 5746823 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| ||||| || || || || || Sbjct 5746824 ATCCAAAAAGAGTCCACCCTCCACTTGGTACT 5746855 Score = 104 bits (114), Expect = 2e-17 Identities = 156/217 (72%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | || |||||| | || Sbjct 5747100 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 5747159 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| |||| || ||||| ||||| || || || ||| Sbjct 5747160 GACACCATCGAG--AATGTTAAAGCCAAAATCCAA-GACAAGGAAGGTATCCCCCCAGAC 5747216 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATT 25173 || || || |||| || ||||||||||| || || |||| || |||| | | || | Sbjct 5747217 CAGCAACGTCTTATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCG--GACT 5747274 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || || || || || || || || ||||| Sbjct 5747275 ACAACATCCAGAAGGAGTCTACTCTGCACTTGGTGCT 5747311 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| || || || || ||||||| |||||||||| | || Sbjct 5746872 ATGCAGATCTTCGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746931 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| || | || ||||| ||||| || || || ||| Sbjct 5746932 GACACCATCGAG--AATGTTAAAGCCAAGATCCAA-GACAAGGAAGGTATCCCCCCAGAC 5746988 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATT 25173 || || || | || || ||||||||||| || || |||| || |||| | | || | Sbjct 5746989 CAGCAACGTCTCATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCG--GACT 5747046 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || ||||| || ||||| || || || || || Sbjct 5747047 ACAACATCCAAAAGGAGTCCACACTTCACTTGGTACT 5747083 >seq4120 Length=16292344 Score = 123 bits (136), Expect = 2e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 51103 TTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCC 51162 ||||| || | ||||| | ||||||||||| |||| | |||| ||||| | ||| Sbjct 14703982 TTAGGGTCTCTTCCATCTATACTGTAATGATCATTTAAATATATTGCATATTTGAGTGCA 14704041 Query 51163 ATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCG 51222 |||| ||| || |||||||| | ||| |||||| |||||||||||||||| | || Sbjct 14704042 TCCTCTGGACTCGGTGTCCATTCTAGAATCTTCTTGCCCCAGTACATGCGCATAAAGCCA 14704101 Query 51223 TGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGTT 51282 ||||||||||| || | |||||| ||| || || ||||||| |||||| |||||| Sbjct 14704102 TGCATCTTGCCTTCTTTGAGCAGCTGCAGTTGTGCTGAATTCCACAGTTCGTCATGAGTT 14704161 Query 51283 T 51283 | Sbjct 14704162 T 14704162 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 51103 TTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCC 51162 ||||| || | ||||| | ||||||||||| || | | || ||||| | ||| Sbjct 14700110 TTAGGGTCTCTGCCATCTATACTGTAATGATCATTCAAGTAAATTGCATATTTGAGTGCA 14700169 Query 51163 ATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCG 51222 |||| ||| ||||||||||| | ||| |||||| ||||||||| || | | | || Sbjct 14700170 TCCTCTGGACTCGGCGTCCATTCTAGAATCTTCTTGCACCAGTACATACGAAGGAAGCCA 14700229 Query 51223 TGCATCTTGCCCTC-GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 ||||||||||| || || || |||| ||| || || ||||||| |||||| ||||| Sbjct 14700230 TGCATCTTGCCTTCTTTGACTAA-CTGCAGTTGTGCTGAATTCCACAGTTCGTCATGAGT 14700288 Query 51282 TT 51283 || Sbjct 14700289 TT 14700290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 51103 TTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCC 51162 |||||||| | ||||| | ||||||||||| || | | || ||||| | ||| Sbjct 14709846 TTAGGATCTCTGCCATCTATACTGTAATGATCATTCAAGTAAATTGCATATTTGAGTGCA 14709905 Query 51163 ATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCG 51222 |||| ||| ||||||||||| | ||| |||||| |||||||||| || || | || Sbjct 14709906 TCCTCTGGACTCGGCGTCCATTCTAGAATCTTCTTGCCCCAGTACATCCGGATAGAGCCA 14709965 Query 51223 TGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGTT 51282 ||||||||||| || |||||| ||| || |||||||| | || || |||||| Sbjct 14709966 TGCATCTTGCCTTCATTTACAAGCTGTAGTTGTGCAGAGTTCCAAAGCTCATCATGAGTT 14710025 Query 51283 T 51283 | Sbjct 14710026 T 14710026 >seq1358 Length=322254 Score = 104 bits (114), Expect = 2e-17 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 25035 ATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACT 25091 ||||| | ||||| || | ||||| ||||| ||| | || |||| || | || Sbjct 4 ATCACTTTGGAAGTAGAACCTTCTGATACTATTGAG--AATGTAAAAGCCAAGATCCAA- 60 Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 || || ||||| || || || ||||||||| | |||| ||||| || |||||||| ||| Sbjct 61 GATAAGGAAGGAATCCCTCCAGACCAACAGAGACTTATATTTGCTGGTAAACAATTGGAA 120 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || || | ||| | ||||| ||||||||||||||| || |||||||| || || Sbjct 121 GACAATAGGACTTTATCTGATTATAATATTCAAAAAGAAAGTACACTACATTTGGTTTTA 180 Query 25212 AGGCTAAGAGGAGGAAA 25228 || |||||||||| || Sbjct 181 AGATTAAGAGGAGGTAA 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433298573237180