Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1114 318 5e-82 seq3133 293 2e-74 seq2310 163 2e-35 seq5346 118 9e-22 seq2115 118 9e-22 seq1358 93.3 4e-14 >seq1114 Length=8361563 Score = 318 bits (352), Expect = 5e-82 Identities = 1126/1733 (65%), Gaps = 56/1733 (3%) Strand=Plus/Plus Query 128776 GACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATG 128835 |||||||| || || || | ||| || | || || ||||| |||| ||||||||||| Sbjct 3013640 GACTTGTCAACTGTGAACTGAATCGCATTAGCGGCAGGCTTTATGCGTAAATAGTACATT 3013699 Query 128836 CCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTG 128895 |||||||||| ||| ||||||| | || | |||||||| ||||| | | || | Sbjct 3013700 CCTGTTTTCAGACCCATTTTCCATGCGTAAAAGTGAATCGAAGTCAATTTTCCATAATTC 3013759 Query 128896 GGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCA 128955 |||| | || | ||| ||||| ||||||||||| || ||||| | || | ||| ||| Sbjct 3013760 GGTTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTATAAATGCACCTCTATCAGCA 3013819 Query 128956 GCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACG 129015 ||||| ||| |||| ||| |||||||| || ||||| || | |||||| | | Sbjct 3013820 GCCATTTTAATTGTTGTTTTAACTGAAATTTCCCAAACTGTTTTATATAACTCTCTTATG 3013879 Query 129016 TGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTT-TGCA--ATAATTTTGTTT 129072 | |||||||| ||||| || || | | || || || || | |||| || || Sbjct 3013880 TCCTTTGGTATACGCTCAATATTTTGAATGGAACCATTATTGTGAATTATAAGATTCTT- 3013938 Query 129073 CGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCG-GTCAAGTATTTGTTTAT 129131 ||| | ||| | | |||| | | | || || ||| || | | ||| | Sbjct 3013939 --CATGTCTTCATCCCATAAATCCGCCTGTGTTAAGTC-TCGCAATAAATGATGGTTAAC 3013995 Query 129132 TACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAA 129191 || || || || || | |||||| || | ||||||||| ||||| || ||||| Sbjct 3013996 AACCTGGAATTCTCCAGACAAAACACGTCTTTGGTAAATGTTTGATGTGAATGGTTCAAA 3014055 Query 129192 CGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAG 129251 || ||||| || ||||| ||||| || || | || || ||||| ||| | |||| Sbjct 3014056 GGACTCATTATTTCCTAAGATTTGTGCTGTAGATGCTGTAGGCATTGGAGCTAATAAAAG 3014115 Query 129252 CGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGA 129311 ||||| || | || || | ||| | || |||||| | ||||||| ||| || Sbjct 3014116 TGAGTTGCGAAGCCCATGTTTGGCAATTTTTTCTTTTAAAACAGACCAGTCC--CATAGA 3014173 Query 129312 T--GTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAA 129369 | || || || | || ||||| ||| ||||| || || || || | ||||| Sbjct 3014174 TCAGTTGGAGTTTTATCCCACATGTCATATTGTAAGATGCCTTGGCTTGTTGGACTTCCT 3014233 Query 129370 AAGTAGGAATCGTGCACGCCGTAAGCTTTT---GCCAATTCGCAACTCGCTTCCAATGCG 129426 || | | | || || | ||||| |||| ||| ||||| || || ||||| Sbjct 3014234 TCATATGTACTATAAACTCCCT---CTTTTTGCGCCAGTTCACAACTGGCCTCTAATGCT 3014290 Query 129427 CCAAAATAAATTGTTTCGGCAATT--TTGGT---GTTCAACACTTTGGCCTGGTCGCTTT 129481 || |||| || |||||| ||| ||||| ||| || | || | || |||| Sbjct 3014291 CCGTAATATATAGTTTCGAAGATTTGTTGGTTAAGTTTAA-----TTGCTTCTTCACTTT 3014345 Query 129482 CGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGG 129541 | || || || ||||| | ||||||| || || |||||||| | || | ||| || | Sbjct 3014346 CATATGGAATGCGCAATAGTACAAATGTATCAGCTAAACCTTGCACTCCAATACCTATAG 3014405 Query 129542 GTCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAA 129601 ||| ||| | || || || | ||| || || || | || | || |||| Sbjct 3014406 GTCTGTGTCGCATGTTAGAGTTCTTTGCTTCAGGCACTGGGTAAAAATTAACATCAATAA 3014465 Query 129602 TTTTGTTTAAATTCT---TGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGT 129658 |||| || | || | ||| | | || || || | ||| ||| || ||| |||| Sbjct 3014466 TTTTATTAAGGTTTTGTGTGATC---GTCTTTGTAACTTCTTTCAACTTTGTAAAGTTGT 3014522 Query 129659 ACTCGCCTACATCGATGTCGACAAA-TTGATTGACACAAATCGAGGCCAAATTGCAGACG 129717 | | ||| | |||||| || || | | ||| || || ||||| || || Sbjct 3014523 A---TGTTTTATCTTCATTGACAAACCTGTTTAATGC-AATTGAAGCTAAATTACAAACT 3014578 Query 129718 GCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATG 129777 ||| ||| | | | ||||||| |||||||| | |||||||||||| |||||| Sbjct 3014579 GCAACTTCATCTGCTGAAGTGTACTCAACAATTTCTGTGCACAAATTACTGCATTTAATT 3014638 Query 129778 GTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGC 129837 ||||| | || |||||||||||||| |||| || | ||||||||||| |||||| || Sbjct 3014639 GTGCCAAGATTTTTTTGATTACTTTTTCTGTTACATGAATCTTTGTACAGCATGTATGGT 3014698 Query 129838 GTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGT 129897 ||||| ||||| ||||| | ||| | || | | | || ||| |||| || || Sbjct 3014699 GTGCCTGTTTCCACTTGTGCTTCTATTATTGCTTTCCATAATTCTTGAGCTCGGACTTGC 3014758 Query 129898 CTTACAAAT-TTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTG 129956 | |||||| || | | | || ||| |||||| | |||||||||| || Sbjct 3014759 TTAACAAATCTTTTTTCCTGT-TCATATTTTTCATACAATGCTTCAAATTCTTCTCC-CC 3014816 Query 129957 TACGGTGTCGAGCAA----CGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCG 130012 || | ||||| ||| | ||| | |||||||| | |||||||||| |||| Sbjct 3014817 AACAAT---CAGCAAGACCCGGGCAATCATGAGGACACATTAGACTCCACATTTCATCTT 3014873 Query 130013 CTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTT 130072 ||| || || |||||||| ||||| || | ||| | ||| || || || |||| ||| Sbjct 3014874 TTTCAACCCGCTTCATAAATAAATCTGGGATCCATAAGGCATAAAATAATTCTCTTGCTC 3014933 Query 130073 TTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCC 130132 | || || || | || |||||| || | || || ||| || | ||||| Sbjct 3014934 TGACCTCTTCTTTGCCAGTATTCTTTTTCAGATCTAAAAACTCAAAAACATCAGAGTGCC 3014993 Query 130133 ACGGTTCAACATAAATTGCCATTGCGCCCTTCCGT---TTGCCCCCTTGGTCAACGTGGC 130189 | ||||||| ||||| || | ||| || ||| ||||| ||||||||||| | | Sbjct 3014994 AAGGTTCAAGGTAAATAGCGAATGCTCCTGGTCGTTTGTTGCCTCCTTGGTCAACATACC 3015053 Query 130190 GCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249 | | ||| ||||| |||| |||||||| | | | || |||| || || || | Sbjct 3015054 TGGCTGTATTATTGTACACTCTCAACATTGGCACAAGGCCATTGGAAACACCATTAGTAC 3015113 Query 130250 TCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAA 130309 | || | | || |||| | | ||| || || ||||| || || || Sbjct 3015114 CTGCTATATATGTACCTTTTGCCCTGATGCAATGTACATGAAGTCCTATACCACCAGCAG 3015173 Query 130310 ATTTTGATATCAACGCGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTCTT 130369 |||| || || | || || | ||| || ||||| || || | || ||||| |||| Sbjct 3015174 ATTTGGAGATTAGGGCACATTGTTTTAGTGTGTCATATATACCCTCAATGCTGTCATCTT 3015233 Query 130370 TAATGTTTAGGAGGAAACACGAGGCCAATTG-GGCGTAACATGATCCGCTGGCAAACAAA 130428 | || || |||||| || || | ||||| || | | | | || || |||||| Sbjct 3015234 TCATAGCTATGAGGAAGCAAGAAGATAATTGTGGTCTTGGA-GTTGCGGCGGAAAACAAT 3015292 Query 130429 GTTGGACTTGCATGTGT-ATACATTTTGTGTGCCATCAAATTGTACGTTTCAA 130480 || ||||| ||||| || | | ||||| | | || ||||||||| ||||||| Sbjct 3015293 GTGGGACTGGCATGAGTGAAATATTTT-TCAGACAACAAATTGTAAGTTTCAA 3015344 Score = 123 bits (136), Expect = 2e-23 Identities = 175/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 22202 TTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTC 22261 ||| |||| || ||| ||||| || || || ||||| | || |||||||| | || Sbjct 2710279 TTTTTACAGTT-TAACAATGCAGATCTTCGTAAAAACCCTTACGGGTAAAACCATAACGT 2710337 Query 22262 TTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGG 22321 | || || ||| || | || || | || || | ||| |||||||||||||| |||| Sbjct 2710338 TAGAGGTTGAAGCCTCTGACACTATCGAAAATGTAAAAGCGAAAATTCAAGACAAAGAGG 2710397 Query 22322 GTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA 22381 | |||||||| ||||| ||| | | || || |||||||||||||| || ||| || | Sbjct 2710398 GCATTCCACCAGATCAGCAAAGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGTA 2710457 Query 22382 CCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCG 22441 | | ||||| |||||||| || || ||||| || | || || || ||| | | || | Sbjct 2710458 CATTGTCCGACTACAACATCCAGAAGGAATCGACACTTCACTTGGTGTTGAGGCTTCGAG 2710517 Query 22442 GAGGT 22446 ||||| Sbjct 2710518 GAGGT 2710522 >seq3133 Length=7630298 Score = 293 bits (324), Expect = 2e-74 Identities = 620/917 (68%), Gaps = 15/917 (2%) Strand=Plus/Minus Query 48798 AAGGGGTTATCGTCGCTGTAATCGAGGACACCGGTCCATCCGCGACCGTACATTGCCACA 48857 ||||| |||| || ||||| | ||||||||||||| ||||| |||||||| || ||| Sbjct 1022515 AAGGGATTATTATCTTCGTAATTGTGGACACCGGTCCAGCCGCGTCCGTACATAGCTACA 1022456 Query 48858 CCCAATACAATTTTGTTGGGTCTCACGCGTTGGTCCAAAAGAGCATTCACCGCAAAATCC 48917 |||| ||||| || || || | || | ||| | | | | ||||| |||| || Sbjct 1022455 CCCACCACAATCTTCTTAGGGTTGACACCTTGAGCAAGCAAATATTTCACACCAAAGTCA 1022396 Query 48918 GTAGTGTAATGTTCGTTTACATTCCATTTCGGAGCATACAATGCCGTCTGGTGACCCAAA 48977 || |||||| ||| || ||||| ||||| || | | ||||| ||||| | Sbjct 1022395 GTTGTGTAAGTTTCCTTAGGGTTCCAAGCGGGAGCGTAAAGCGGAGTCTGATGACCGAGG 1022336 Query 48978 TCAACATTCGACCAGGCACCCTTAAAATCGTAGTTCATTAAAAATATTTTATCTAAATAA 49037 | | || |||||||| || || || ||||| |||| | || || | || | || Sbjct 1022335 GTATCGTTAGACCAGGCGCCTTTGAAGTCGTAACTCATAAGGAAGATGTGGTCCATGTAC 1022276 Query 49038 TTTTGGGCATCGTTGTATTTAACCACGGCAATTTTGTCGTCGCCTGCGCTAATGGCGCTT 49097 || || || || |||| | || || ||| || || || || ||||| || Sbjct 1022275 TTCTGAGCCTCACTGTAATCGACAACTTGAATCTTATCCCATCCAGCACTAATAGCAGAG 1022216 Query 49098 GTTAATTCAAAATTACGGCCGGTTTCGCGTTC---AAGATCGTCGAGCATTTCGCGTAAT 49154 || | || | || ||||| || ||| ||| |||| | |||||| || ||| Sbjct 1022215 GTCAGCTCGTATTTCTTACCGGTCTC---TTCGGAAAGGTCGTTCAACATTTCACGCAAT 1022159 Query 49155 TCTTTCAAGAGAACAACATAAGTGTGTCCGTCGTGTTGCGAATCGCCCAACAACGGATTC 49214 || |||| | |||| ||| | |||||| | || || | ||| | ||||| Sbjct 1022158 TCCTTCATTAATTCAACGTAAACATCTCCGTCCT--TGGGACT-GCCAAGGTCTGGATTA 1022102 Query 49215 GCCCCTTTGCCGCCCGGAAATTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCAAGTT 49274 || || || ||||| || ||||||||||| || || || |||||||| || ||||| || Sbjct 1022101 GCTCCCTTACCGCCAGGGAATTCCCAATCGATATCTACACCGTCGAAGAACTTCCATGTC 1022042 Query 49275 AACAAAAATTCGCGCACCGAATCTACAAACACGTCACGTTTATGCGCATC-GTGCATAAA 49333 | || || ||| ||||| || || || | || | || ||| | || Sbjct 1022041 TGAAGGAAATCTTTCACAGAATCCACGAAGCGATCTCTCTTCTCTTTGTCTGTGAAGAA- 1021983 Query 49334 GTAAAATGGATCGGACAACGTCCAACCCCCGATGGATGGCAATACTTTTAAATTGGGATT 49393 | | || ||||| | | ||||| || |||||||| || | | ||| | | || | Sbjct 1021982 GAAGAAGGGATCTGCAAGAGTCCAGCCACCGATGGAAGGTAGGATTTTAAGGTCAGGCCT 1021923 Query 49394 TGCTTTTTTAATTGCCATCAATTGACCGAAATTGCCTTTGTACGGTTCGTTCCAAGCGGA 49453 |||| ||||| | ||||| ||||| || ||||||||||| || || ||||| | || Sbjct 1021922 GGCTTGTTTAAGAGACATCAGCTGACCAAAGTTGCCTTTGTATGGCTCATTCCAGGAAGA 1021863 Query 49454 CACACCTTTTTGGGGTTTTTGCAGCGCAGCCCACGGATCGTGAATAGACACTTTGAAATC 49513 | ||| ||||| || || || || |||||||||||||||||||| || ||||||||||| Sbjct 1021862 AAGACCCTTTTGTGGCTTCTGAAGAGCAGCCCACGGATCGTGAATTGAAACTTTGAAATC 1021803 Query 49514 GTCCCGGCCAGCGCAACTTTTTTGTAATGCCTCAAAACTGCC--CGTTATCGTTTTCAAA 49571 || ||||| ||| | ||| | || | |||||||| || | || |||||| Sbjct 1021802 TTCGCGGCCGCTGCATGATCGTTGAAGAGCTTGGAAACTGCCTTCGATTTC--CTTCAAA 1021745 Query 49572 CTGTCGTTAATGCCGTCGCCCCCGCAAATTGGCACGAAACCGTACAGCAGATGCGATAGA 49631 |||||||| ||||| ||||| ||||||||||| | |||||||||| ||||| | ||| Sbjct 1021744 CTGTCGTTGATGCCATCGCCTCCGCAAATTGGAATAAAACCGTACAAAAGATGAGTCAGA 1021685 Query 49632 TTTGGTGCGGGTACGCGATCGGCGGGAAACGATCGACCGTACACACCCCACTCGACAAAG 49691 || || ||||| ||||| | || || || ||| |||||||| || || ||| Sbjct 1021684 TTAGGAATTGGTACACGATCAACAGGGAATTTTCTTGGGTAGACACCCCATTCAACGAAG 1021625 Query 49692 TACGCAGCGACAACTTT 49708 ||||| |||||||||| Sbjct 1021624 TACGCTCCGACAACTTT 1021608 >seq2310 Length=6428792 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || |||||||| || ||||| || || || ||||||| ||||||||| || || Sbjct 5746188 ATGCAGATCTTTGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746247 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||||||||| ||||| || || || || Sbjct 5746248 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746307 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||||||| |||| ||| || || |||||||||| || Sbjct 5746308 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTATAAT 5746367 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| |||||| | || || || || || |||| || ||| Sbjct 5746368 ATCCAAAAAGAGTCCACCCTCCACTTGGTGTTACGTCTGCGAGGTGGT 5746415 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| ||||| |||||| || | Sbjct 5746416 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTGGAACCCTCA 5746475 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| ||||||||||||||||| ||||| || || || || Sbjct 5746476 GACACCATTGAGAATGTTAAAGCCAAAATTCAAGACAAGGAAGGTATCCCTCCAGACCAG 5746535 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||||||| |||| ||| || || |||||||||||||| Sbjct 5746536 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTACAAC 5746595 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || |||||||| | || || || | || |||| || ||| Sbjct 5746596 ATTCAGAAGGAATCCACACTCCACTTGGTACTACGTCTGCGAGGTGGT 5746643 Score = 152 bits (168), Expect = 4e-32 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || ||||| || || || ||||||| ||||||||| || || Sbjct 5746872 ATGCAGATCTTCGTTAAGACCTTAACGGGAAAGACCATCACTCTCGAAGTGGAACCCTCC 5746931 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||||||||| ||||| || || || || Sbjct 5746932 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746991 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||||||||| |||||| ||| || |||| || |||||| Sbjct 5746992 CAACGTCTCATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCGGACTACAAC 5747051 Query 22399 ATTCAAAAAGAATCCAC 22415 || ||||| || ||||| Sbjct 5747052 ATCCAAAAGGAGTCCAC 5747068 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||| || || || |||| || || |||||| || | Sbjct 5745732 ATGCAGATCTTTGTGAAGACCTTAACAGGAAAGACCATCACCCTCGAGGTGGAACCCTCT 5745791 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||||||||| ||||| || || || || Sbjct 5745792 GACACCATCGAGAATGTTAAAGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5745851 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||||||| |||| ||| || || |||||||||||||| Sbjct 5745852 CAACGTCTCATCTTCGCCGGCAAACAGCTAGAAGATGGTCGTACACTCTCCGATTACAAC 5745911 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || |||||||| | || || || | || ||||| || ||| Sbjct 5745912 ATTCAGAAGGAATCCACACTCCACTTGGTACTACGTTTGCGAGGTGGT 5745959 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||||||||| || || || || || || |||| | || || ||| | | Sbjct 5745504 ATGCAAATTTTTGTTAAGACCTTGACTGGCAAGACCATCACATTGGAGGTTGAACCTTCA 5745563 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | ||| || || ||||| ||||| ||||| || || || || Sbjct 5745564 GATACCATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAAGGTATCCCCCCAGACCAG 5745623 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| |||||||| |||||| || || |||| ||||||||| Sbjct 5745624 CAACGTCTCATCTTTGCCGGTAAACAGTTGGAGGATGGACGTACACTCTCTGATTACAAC 5745683 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || |||||||| | || || || ||||| |||| || || Sbjct 5745684 ATTCAGAAGGAATCCACACTCCACTTGGTATTGCGTCTGCGAGGTGG 5745730 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || || || || ||||| |||| | || || ||| || | Sbjct 5745276 ATGCAGATTTTTGTGAAGACCTTGACAGGCAAAACCATCACATTAGAGGTTGAACCCTCG 5745335 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| ||||||||||||||||| || ||||| || ||||| Sbjct 5745336 GACACAATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 5745395 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || ||| | || ||| ||||| | || || ||||| Sbjct 5745396 CAACGTCTTATCTTTGCGGGTAAGCAGCTCGAAGATGGTCGCACACTTTCGGACTACAAT 5745455 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| ||||| || |||| || || | || ||| | ||||| Sbjct 5745456 ATCCAAAAGGAATCGACACTACACTTGGTGCTTCGTTTGAGAGGAGG 5745502 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | || ||||| | | Sbjct 5747100 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 5747159 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| ||||| ||||||||||| ||||| || || || || Sbjct 5747160 GACACCATCGAGAATGTTAAAGCCAAAATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5747219 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || |||||||||||||| |||||| ||| || |||| || |||||| Sbjct 5747220 CAACGTCTTATCTTCGCCGGCAAACAGTTGGAGGATGGCCGTACACTCTCGGACTACAAC 5747279 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 5747280 ATCCAGAAGGAGTCTAC 5747296 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || ||||| |||| | ||||||||| || | Sbjct 5744820 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5744879 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| |||||| ||||||||||| || || || || || || Sbjct 5744880 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5744939 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||||||| | || || || || | || || |||||| Sbjct 5744940 CAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGACGGGCGAACATTGTCTGACTACAAC 5744999 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | || || || | || |||| || ||| Sbjct 5745000 ATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGGT 5745047 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || ||||| | || | ||||| ||| | | Sbjct 5745960 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746019 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||||||||| ||||| || || || || Sbjct 5746020 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGTATCCCCCCAGACCAG 5746079 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || |||||||||||| |||||||| || || |||| || |||||| Sbjct 5746080 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGATGGACGTACACTCTCTGACTACAAC 5746139 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| |||||| | || || || |||| | || || ||| Sbjct 5746140 ATCCAAAAAGAGTCCACCCTCCACTTGGTACTGCGTCTCCGTGGTGGT 5746187 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || ||||| |||| | ||||||||| || | Sbjct 5745048 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATCACATTAGAAGTGGAACCCTCT 5745107 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || ||||| |||||| ||||||||||| || || || || || || Sbjct 5745108 GACACAATTGAAAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATCCCCCCAGACCAG 5745167 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | || || || || | || || |||||| Sbjct 5745168 CAGAGATTGATCTTTGCCGGCAAGCAGCTGGAAGACGGACGAACATTGTCTGACTACAAC 5745227 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || |||||||| | || || || | || |||| || ||| Sbjct 5745228 ATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGGT 5745275 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || ||||| | || | ||||| ||| | | Sbjct 5746644 ATGCAGATCTTTGTCAAGACCTTGACTGGCAAAACCATTACCTTAGAAGTCGAACCTTCT 5746703 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || ||||| ||||| || || || || || || Sbjct 5746704 GACACCATCGAGAATGTTAAGGCCAAGATCCAAGATAAGGAAGGCATCCCCCCAGACCAG 5746763 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || |||||||||||| |||||||| || || |||| || |||||| Sbjct 5746764 CAGAGATTGATCTTCGCCGGCAAACAGCTAGAGGATGGACGTACACTCTCTGACTACAAC 5746823 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| |||||| | || || || |||| | || || ||| Sbjct 5746824 ATCCAAAAAGAGTCCACCCTCCACTTGGTACTGCGTCTCCGTGGTGGT 5746871 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| || || || || || || || |||| | || ||||| | Sbjct 5744589 AAGATGCAGATTTTTGTGAAGACCTTGACGGGCAAGACCATCACCTTGGAGGTGGAGCCT 5744648 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || | || || ||||||||||| ||||| || || || || Sbjct 5744649 TCGGACACAATTGAAAATGTTAAGGCCAAGATTCAAGACAAAGAGGGCATCCCCCCAGAC 5744708 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || ||||||||||||||| | || ||| ||||| | || || ||| Sbjct 5744709 CAGCAGAGATTGATCTTTGCCGGCAAACAGCTGGAAGATGGACGCACATTGTCTGACTAC 5744768 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || |||||||| | || || || | || |||| || ||| Sbjct 5744769 AACATCCAGAAGGAATCCACACTTCACTTGGTACTCCGTCTGCGTGGTGGT 5744819 >seq5346 Length=541963 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || ||||| || || || ||||| | ||||| ||| | | Sbjct 231237 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 231296 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || || ||||| || || || || || || || ||| Sbjct 231297 GATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCAA 231356 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||||||||| || ||||| || || || | | || | |||||||| || Sbjct 231357 CAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAAT 231416 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||| || ||||||| ||||| |||| | |||||| Sbjct 231417 ATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGT 231464 >seq2115 Length=629047 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || ||||| || || || ||||| | ||||| ||| | | Sbjct 361007 ATGCAGATTTTTGTAAAGACATTAACAGGAAAGACAATCACTTTGGAAGTAGAACCTTCT 360948 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || || ||||| || || || || || || || ||| Sbjct 360947 GATACTATTGAGAATGTAAAAGCCAAGATCCAAGATAAAGAAGGAATCCCTCCAGACCAA 360888 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||||||||| || ||||| || || || | | || | |||||||| || Sbjct 360887 CAGAGACTTATATTTGCTGGTAAACAATTGGAAGACAATAGGACTTTATCCGATTATAAT 360828 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||| || ||||||| ||||| |||| | |||||| Sbjct 360827 ATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGATTAAGAGGAGGT 360780 >seq1358 Length=322254 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22256 TCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACA 22315 ||||| | ||||| ||| | | ||||| | || || | ||| || || ||||| | Sbjct 5 TCACTTTGGAAGTAGAACCTTCTGATACTATTGAGAATGTAAAAGCCAAGATCCAAGATA 64 Query 22316 AGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATC 22375 |||| || || || || || ||||| | ||||||||||| || ||||| || || || Sbjct 65 AGGAAGGAATCCCTCCAGACCAACAGAGACTTATATTTGCTGGTAAACAATTGGAAGACA 124 Query 22376 ACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGAT 22435 | | || | || ||||| || |||||||||||| || ||||||| ||||| ||| Sbjct 125 ATAGGACTTTATCTGATTATAATATTCAAAAAGAAAGTACACTACATTTGGTTTTAAGAT 184 Query 22436 TGCGCGGAGGT 22446 | | |||||| Sbjct 185 TAAGAGGAGGT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419699496796180