Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3290 105 1e-17 seq4120 95.1 2e-14 seq3117 95.1 2e-14 seq3105 91.5 3e-13 seq2496 91.5 3e-13 seq2352 91.5 3e-13 seq2310 91.5 3e-13 seq2289 91.5 3e-13 seq406 91.5 3e-13 seq2386 89.7 1e-12 seq4077 86.0 1e-11 seq3115 86.0 1e-11 seq2149 86.0 1e-11 seq1517 86.0 1e-11 seq336 86.0 1e-11 seq2195 84.2 4e-11 >seq3290 Length=1589400 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142051 ATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGA 142110 |||||||||||||||| |||| ||||||||||||||||||||||||||| | |||||||| Sbjct 487687 ATGTCTCTGTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGA 487746 Query 142111 CCCCCGCCAGAGA 142123 |||| ||||||| Sbjct 487747 TCCCCACCAGAGA 487759 >seq4120 Length=16292344 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 13850385 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 13850444 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 13850445 AGCCCCACGTTGGGC 13850459 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 775965 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 776024 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 776025 CCCCACGTTGGGC 776037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5973902 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5973961 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5973962 CCCCACGTTGGGC 5973974 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5997572 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5997513 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5997512 CCCCACGTTGGGC 5997500 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 9108141 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 9108200 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 9108201 CCCCACGTTGGGC 9108213 >seq3117 Length=6198915 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 142047 ACGCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106 || |||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||| Sbjct 4419299 ACACATGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGT 4419358 Query 142107 TCGACCCCCGCCAGAGACGC 142126 |||| |||| |||| || || Sbjct 4419359 TCGATCCCCACCAGGGATGC 4419378 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142047 ACGCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106 || || ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||| Sbjct 2690382 ACACACGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGT 2690323 Query 142107 TCGACCCCCGCCAGAGA 142123 |||| |||| |||| || Sbjct 2690322 TCGATCCCCACCAGGGA 2690306 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| |||||||||| ||| ||||||||||||||||||||||||||| | ||||||| Sbjct 2691961 CACGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 2691902 Query 142110 ACCCCCGCCAGAGA 142123 | |||| |||| || Sbjct 2691901 ATCCCCACCAGGGA 2691888 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 4421496 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 4421437 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 4421436 CCCACCAGGGA 4421426 >seq3105 Length=7089461 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 6845583 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 6845524 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 6845523 CCCCACGTTGGGC 6845511 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 6850058 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATATCAGGGTCGTGGGTTCGAG 6850117 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 6850118 CCCCACGTTGGGC 6850130 >seq2496 Length=4550066 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4097664 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4097723 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4097724 CCCCACGTTGGGC 4097736 >seq2352 Length=6838751 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2762856 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2762797 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2762796 CCCCACGTTGGGC 2762784 >seq2310 Length=6428792 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2207802 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2207743 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2207742 CCCCACGTTGGGC 2207730 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2211678 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2211737 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2211738 CCCCACGTTGGGC 2211750 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2216722 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2216781 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2216782 CCCCACGTTGGGC 2216794 >seq2289 Length=8021128 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5750291 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5750232 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5750231 CCCCACGTTGGGC 5750219 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5770541 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5770482 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5770481 CCCCACGTTGGGC 5770469 >seq406 Length=2844993 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 294399 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 294458 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 294459 CCCCACGTTGGGC 294471 >seq2386 Length=7418803 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 6369481 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 6369422 Query 142113 CCCGCCAGAGACGC 142126 ||| |||| || || Sbjct 6369421 CCCACCAGGGATGC 6369408 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||| Sbjct 5870366 AGCCCGGCTAGCTCAGTCGGTCGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5870425 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5870426 CCCCACGTTGGGC 5870438 >seq4077 Length=533617 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| Sbjct 80639 AGCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAG 80580 Query 142563 CCCCACATCGGG 142574 |||| | ||||| Sbjct 80579 CCCCGCGTCGGG 80568 >seq3115 Length=171953 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| Sbjct 118005 AGCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAG 118064 Query 142563 CCCCACATCGGG 142574 |||| | ||||| Sbjct 118065 CCCCGCGTCGGG 118076 >seq2149 Length=136330 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| Sbjct 18131 AGCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAG 18072 Query 142563 CCCCACATCGGG 142574 |||| | ||||| Sbjct 18071 CCCCGCGTCGGG 18060 >seq1517 Length=354486 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| Sbjct 324839 AGCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAG 324780 Query 142563 CCCCACATCGGG 142574 |||| | ||||| Sbjct 324779 CCCCGCGTCGGG 324768 >seq336 Length=238528 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||||||||| Sbjct 233386 AGCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAG 233445 Query 142563 CCCCACATCGGG 142574 |||| | ||||| Sbjct 233446 CCCCGCGTCGGG 233457 >seq2195 Length=550741 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||| ||||||| ||| ||||| |||||||||| Sbjct 161047 GCCCGGCTAGCTCAGTCGGTAGAGCATTAGGCTCTTAACCTAAGGGTCGCGGGTTCGAGC 161106 Query 142564 CCCACATCGGG 142574 ||| | ||||| Sbjct 161107 CCCGCGTCGGG 161117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027763421446052