Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4120 93.3 8e-14 >seq4120 Length=16292344 Score = 93.3 bits (102), Expect = 8e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 42610 TGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACT 42669 ||||||| || | || || | ||||| | ||||||||||| |||||||| || | | Sbjct 7436228 TGTTCAATGCTGTTGAAACTTTACCCTGTGTAAAGAAGAAGGCAGACTGGGCACTGCAAT 7436169 Query 42670 GGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAG 42728 |||||| || | ||| |||| || || || ||| | || |||||| | || || ||| Sbjct 7436168 GGATCGCCAG-CAAGACAGCAAACTTTGGTGAAAGGATAGTTGCCTTTGCTGCTGTGGAG 7436110 Query 42729 GGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATG 42788 ||||||||||| || || ||| || || || |||||| | ||| || | | ||| Sbjct 7436109 GGCATCTTCTTTTCTGGAAGCTTTGCGTCAATATTCTGGTTGAAGAAGCGTGGCTTAATG 7436050 Query 42789 CCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 || || || |||||| || || || || ||||| |||| Sbjct 7436049 CCTGGTCTGACCTTCAGCAATGAGCTGATTTCTAGGGATGAGG 7436007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944273426774720