Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3951 84.2 2e-11 >seq3951 Length=6844153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/225 (70%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || || ||||| |||| ||| | || || || |||||||||||||||||||| || || Sbjct 4102014 CCTGTGACATGTGCAATCATGTGTGTCAAAAGCGAATAGCTGGCAATGTTAAATGGCACG 4102073 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAA---AGCTCACCGTCAGCT 20356 |||| ||||| ||| | ||| ||||||| | | || || | | || | ||| Sbjct 4102074 CCCAGCCCCATATCTGCACTCCTTTGATACA--TTA-AGCAATTCAATTTTCCATTAGCC 4102130 Query 20357 ACATAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGAC--AAGTCCGCC 20413 |||| || || ||| |||| ||||| || || || ||||| ||| | || | | Sbjct 4102131 ACATGGAACTGAACAAGACAA-TGACAAGGAGGTAGAGCCAT--TTGACTGAGATCTGAC 4102187 Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTT 20458 || ||||| |||||||| || || || || ||| ||||||||| Sbjct 4102188 GGATTCCATGCACACATTATCATCCTCCTGTCGGCTGGATTATTT 4102232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441342058384480