Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1114 93.3 5e-14 >seq1114 Length=8361563 Score = 93.3 bits (102), Expect = 5e-14 Identities = 446/704 (63%), Gaps = 25/704 (4%) Strand=Plus/Plus Query 113933 CGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGG 113992 ||||| | || || || | ||| |||| |||||| ||||||| || || |||||||| Sbjct 3014021 CGTCTTTGGTAAATGTTTGATGTGAATGGTTCAAAGGACTCATTATTTCCTAAGATTTGT 3014080 Query 113993 GCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTA 114052 || || || ||||| ||||| || || | | ||| ||| || || || | || | Sbjct 3014081 GCTGTAGATGCTGTAGGCATTGGAGCTAATAAAAGTGAGTTGCGAAGCCCATGTTTGGCA 3014140 Query 114053 ATGCGTTCCTTGAGGGCGTCCCAGTCG--TAGTTGAGCT----TTGTCTCCCCCTGCCAC 114106 || ||| || | | |||||| ||| | || | || | |||| || Sbjct 3014141 ATTTTTTCTTTTAAAACAGACCAGTCCCATAGATCAGTTGGAGTTTTATCCC------AC 3014194 Query 114107 ATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCC 114166 || ||| | || | ||| |||||| | ||| ||| ||| |||| || ||| Sbjct 3014195 ATGTCATATTGTAAGATGCCTTGGCTTGTTGGACTTCCTTCATATGTACTATAAACTCCC 3014254 Query 114167 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 114226 || | ||||| ||| | || ||||| | ||| ||| ||| || || || || || Sbjct 3014255 TCTTTTTGCGCCAGTTCACAACTGGCCTCTAATGCTCCGTAATATATAGTTTCGAAGATT 3014314 Query 114227 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACA 114286 | || | | | || || || ||| | | | || | | | |||| | Sbjct 3014315 TGTTGGTTAAGTTTAATTGCTTCTTCACTTTCATATGGAATGCGCAATAGTACAAATGTA 3014374 Query 114287 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 114346 || || | |||||| || || | || || || | |||| ||| ||||| || || Sbjct 3014375 TCAGCTAAACCTTGCACTCCAATACCTATAGGTCTGTGTCGCATGTTAGAGTTCTTTGCT 3014434 Query 114347 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 114406 ||| || |||||||| ||| |||| |||| || |||| |||| |||| Sbjct 3014435 TCAGGCACTGGGTAAAAATTAACATCAATAATTTTATTAAGGTTTTGTGTGATCGTCTTT 3014494 Query 114407 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATACTTA 114463 || | ||| | | |||| |||| | || || | ||||||||||| || | Sbjct 3014495 GTAACTTCTTTCAACTTT--GTAA----AGTTGTATGTTTTATCTTCATTGACAAACCTG 3014548 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTA 114521 | || ||||| || | |||||| || | ||||| || | ||||||||| | Sbjct 3014549 TTTAATGCAATTGAAGCTAAATTACAAACTGCAACTTCATCTGCTGA--AGTGTACTCAA 3014606 Query 114522 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 114581 |||||| || |||||||| | ||||| ||||| | || |||||||| ||| Sbjct 3014607 CAATTTCTGTGCACAAATTACTGCATTTAATTGTGCCAAGATTTTTTTGATTACTTTTTC 3014666 Query 114582 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCC 114625 ||||||| | ||| ||||| ||||||||||| || || || ||| Sbjct 3014667 TGTTACATGAATCTTTGTACAGCATGTATGGTGTGCCTGTTTCC 3014710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597311994321760