Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1114 102 1e-16 >seq1114 Length=8361563 Score = 102 bits (112), Expect = 1e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 203827 TCGAACCTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAG 203886 || ||| || | |||||| || ||||||||||| || || |||||||| | | | | Sbjct 3013630 TCTAACTTTAGACTTGTCAACTGTGAACTGAATCGCATTAGCGGCAGGCTTTATGCGTAA 3013689 Query 203887 ATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTT 203946 ||||||||| || || || || ||| | | ||| |||| | ||| || |||| || ||| Sbjct 3013690 ATAGTACATTCCTGTTTTCAGACCCATTTTCCATGCGTAAAAGTGAATCGAAGTCAATTT 3013749 Query 203947 GCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGC 204006 | || || || |||| |||||||| | ||| || |||||||| || ||| || | Sbjct 3013750 TCCATAATTCGGTTCAGCCACATGAATGTTAAAAGATTGACTTTGGTCTAT-AAATGCAC 3013808 Query 204007 C-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | | ||| || ||||| || || | || || ||||| ||||| || || || Sbjct 3013809 CTCTATCAGCAGCCATTTTAATTGTTGTTTTAACTGAAATTTCCCAAACTGTTTT 3013863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795099817440320