Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1673 100 4e-16 >seq1673 Length=160240 Score = 100 bits (110), Expect = 4e-16 Identities = 198/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Minus Query 102047 ACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCA 102106 ||| ||||| | |||||||| ||| | || || || || || || | || || | Sbjct 45273 ACTTATAGATACGTATATTAGTGATCCGGACGAAAAAAATCATCTTCTTAATGCTATAAA 45214 Query 102107 AACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAA 102163 ||| | |||| |||| ||||||| || ||||||||| |||| ||| || |||| ||| Sbjct 45213 CACAATACCATCTATTAAAAAGAAGGCTGATTGGGCTTTGAAATGGATTAAAGATAAAAA 45154 Query 102164 GTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 || | | |||||| || | |||||||||| |||||||| || || ||||| Sbjct 45153 ATC---TACTTTTGCTACCAGAGTTATCGCATTTGCTTGTGTTGAAGGAATTTTCTTTAG 45097 Query 102224 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 102282 ||| | || ||| | || | ||| | ||||| ||||||||||||| ||| | | | Sbjct 45096 TGGAGCATT-TGCTTCGATCTTCTGGTTAAAGAAAAGAGGTCTCATGCCTGGTTTGTCGT 45038 Query 102283 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | || || || ||||| || || || || || || |||||||| Sbjct 45037 TTTCAAATGAACTTATTAGCCGAGATGAAGGTCTGCATTGCGAGTTTGC 44989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620699165291840