Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1251 84.2 3e-11 >seq1251 Length=283413 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 98698 TAAAGTTGCCCAGTTGAGT-GGTTACATTGCGGAACAAACTGATTATAAACACGGTGAAC 98756 |||||| || || || ||| ||||| ||||| ||||| |||| ||||| ||| |||||| Sbjct 60756 TAAAGTAGCACAATT-AGTAGGTTATATTGCAGAACATACTGCTTATAGACATGGTGAAG 60698 Query 98757 AAAACCTTTGTGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATATAA 98816 | ||| | || ||| || || || ||||||||||| || | |||||||| | Sbjct 60697 TATCACTTGCTTCTACTATAGTAGCTTTAGCTCAAGATTTTGTTGGATCTAATAATATTA 60638 Query 98817 CACTACTTGA--GCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATT 98870 || || | ||| ||||||| || ||| | |||||| ||||||||||||| Sbjct 60637 A--TATTTTAATGCCTAATGGTCAATTCGGTTCTAGACTTATGGGAGGTAAAGATT 60584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658357342217120