Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4120 122 2e-22 seq1924 98.7 2e-15 >seq4120 Length=16292344 Score = 122 bits (134), Expect = 2e-22 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||||||||| |||||||| ||||| || ||||| || || ||| ||| || || Sbjct 7436434 GTACATCTCAGAGTGTACATTCTCCATAGCAATTTGGAATCCATAAAAGAACCTTGCTTC 7436493 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | | || |||||| || |||| ||| | ||||||||||| ||||| ||||| || Sbjct 7436494 ACCAATTTGAACTTCTTGTGAAAATCGCTCTACTAGATTCTCATTAACTATACCATCAGA 7436553 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTC 48585 ||||||||| || || | |||||||||| || || | ||| Sbjct 7436554 AGCAGCAAAAAATGCCAAAACATGTTTAATAAAGTGCCTCTC 7436595 Score = 84.2 bits (92), Expect = 4e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 48167 ATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATT 48226 || ||| | ||| |||| ||||||||||| | || | || || | |||||| ||| Sbjct 7436021 ATCAGCTCATTGCTGAAGGTCAGACCAGGCATTAAGCCACGCTTCTTCAACCAGAATATT 7436080 Query 48227 GCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCT 48286 | ||| || ||||| ||||||||||||||||| || || || || | ||| || Sbjct 7436081 GACGCAAAGCTTCCAGAAAAGAAGATGCCCTCCACAGCAGCAAAGGCAACTATCCTTTCA 7436140 Query 48287 CCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTT 48342 || || || ||||| | |||||| || |||||||||||||||||||| Sbjct 7436141 CCAAAGTTTGCTGTCTTGCTGGCGATCCATTGCAGTGCCCAGTCTGCCTTCTTCTT 7436196 >seq1924 Length=7285565 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 241476 CTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTT 241535 ||||||| || ||| |||| |||||| ||||| |||||| | ||| ||||| |||| Sbjct 755050 CTGCGTTCTCGCCCTTCAGCAGCTTCACCTTCTCTTCCAGCTTTGAGATACGTTCAAGTT 754991 Query 241536 TGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGA 241595 | ||||| |||||||||| ||| |||| ||||||| ||| ||| || || ||| | Sbjct 754990 TCCGCCGCCGGCATTTGGAGGCGGCCACTCGGTTCCTCTGTCGCTTGCGCTCTAGCTTTA 754931 Query 241596 TGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 | | ||||| ||||||||||| || ||| Sbjct 754930 TTCTCTCCTGAGTGTCCATGTCGATGGGGGAC 754899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931467918740480