Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Papilio_20xuthus_20[refseq_20GCF_5F000836235.1_202015-02-02] 5,572 sequences; 243,890,167 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1390 91.5 3e-13 >seq1390 Length=76047 Score = 91.5 bits (100), Expect = 3e-13 Identities = 288/433 (67%), Gaps = 10/433 (2%) Strand=Plus/Plus Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662 ||||| || || || ||||||||||| || || |||||| || || || || | Sbjct 54373 GCATTTTTCGCTGCTTCTGATGGTATTGTAAATATGAATCTTGTTGAAAGGTTTTCCGAG 54432 Query 25663 GAAGTGCAGTA-CGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGT 25721 ||||| || | | ||||| || ||||| || || |||||| | | ||||||||| | Sbjct 54433 GAAGT-CACCATTTTAGAGGCAAAATGTTTTTATGGATTCCAGGTAGTTATCGAAAATAT 54491 Query 25722 GCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGCCGAGAGAG 25780 || ||||| ||||| | ||| | ||| ||||| |||| || | ||| | | Sbjct 54492 CCATTCTGAAATGTATTCTTTACTTATAGAT-ACGTATATTAGTGATCCGGACGAAAAAA 54550 Query 25781 ATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGCGCGGTGGGCC 25839 ||| || || ||| || | ||| ||||| || || | |||||| ||||| Sbjct 54551 ATCATCTTCTTAATGCTAT-AAACACAATACCATCTATTAAAAAGAAGGCTGATTGGGCA 54609 Query 25840 ATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGC-GGCTGGTAGCCTTTGCTGC 25898 |||| ||||| || | | | |||| ||| || | | | | | || |||||| Sbjct 54610 TTGAAATGGATAAAAGACAAAAAATCTAC-TTTTGCTACCAGAGTTATCGCATTTGCTTG 54668 Query 25899 TGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGG 25958 ||| || || || || || || || | ||||| | ||||||||| | ||| | ||| | Sbjct 54669 TGTCGAAGGAATTTTCTTTAGTGGAGCATTTGCTTCGATCTTCTGGTTAAAG-AAAAGAG 54727 Query 25959 GAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACA 26017 | | |||||| || ||| ||||| || || ||||| ||| | || || ||||| || Sbjct 54728 GTCTCATGCCTGGTTTGTCGTTTTCAAATGAACTCATTAGCCGAGATGAAGGTCTGCATT 54787 Query 26018 GAGATTTTGCCTG 26030 | || ||||| || Sbjct 54788 GCGAATTTGCTTG 54800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928780105959680